Evidence map›Paper›PMID 19946213›Full record

ArticleCell cycle (Georgetown, Tex.)2009

A serine cluster mediates BMAL1-dependent CLOCK phosphorylation and degradation.

Mary L Spengler, Karen K Kuropatwinski, Molly Schumer, Marina P Antoch

Open access · hybridAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 1 synthesis or guideline pooled it, 141 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Post-Translational Modifications in Animal Circadian Clocks.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Circadian rhythm disruption and endocrine-related tumors.World journal of clinical oncology · 2024
    Review
  10. Article
  11. Review
  12. Phosphorylation of DNA-binding domains of CLOCK-BMAL1 complex for PER-dependent inhibition in circadian clock of mammalian cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Review
  14. Review
  15. Review
  16. Mood phenotypes in rodent models with circadian disturbances.Neurobiology of sleep and circadian rhythms · 2022
    Review
  17. Input integration by the circadian clock exhibits nonadditivity and fold-change detection.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Review
  19. Review
  20. Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Mary L SpenglerDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, NY, USA.
Karen K Kuropatwinski
Molly Schumer
Marina P Antoch
Rosalind Franklin Institute · GBRoswell Park Comprehensive Cancer Center · US

Funding

Molecular Mechanism of Circadian Transcriptional ControlR01GM075226 · NIGMS · ROSWELL PARK CANCER INSTITUTE CORP · PI ANTOCH, MARINA · 2006 to 2009
$1.2M
NIGMS NIH HHS GM550926NIGMS NIH HHS R01 GM075226
6 · The paper itself

Abstract

The circadian clock regulates biological processes from gene expression to organism behavior in a precise, sustained rhythm that is generated at the unicellular level by coordinated function of interlocked transcriptional feedback loops and post-translational modifications of core clock proteins. CLOCK phosphorylation regulates transcriptional activity, cellular localization and stability; however little is known about the specific residues and enzymes involved. We have identified a conserved cluster of serines that include, Ser431, which is a prerequisite phosphorylation site for the generation of BMAL dependent phospho-primed CLOCK and for the potential GSK-3 phosphorylation at Ser427. Mutational analysis and protein stability assays indicate that this serine cluster functions as a phospho-degron. Through the use of GSK-3 activators/inhibitors and kinase assays, we demonstrate that GSK-3beta regulates the degron site by increasing CLOCK phosphorylation/degradation, which correlates with an increase in the expression of CLOCK responsive promoters. Stabilization of phospho-deficient CLOCK delays the phase of oscillation in synchronized fibroblasts. This investigation begins the characterization of a complex phospho-regulatory site that controls the activity and degradation of CLOCK, a core transcription factor that is essential for circadian behavior.

Indexed as

Amino Acid SequenceAnimalsARNTL Transcription FactorsBiological ClocksCatalytic DomainCell LineCircadian RhythmCLOCK ProteinsFibroblastsGene Expression RegulationGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaHumansMiceMice, Inbred C57BLMice, KnockoutARNTL Transcription FactorsBmal1 protein, mouseClock protein, mouseCLOCK ProteinsGlycogen Synthase Kinase 3Glycogen Synthase Kinase 3 betaGSK3B protein, humanGsk3b protein, mouseSerineTranscription Factors

Identifiers

PMID19946213
PMCPMC4073639
OpenAlexW2004787581

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.