Evidence map›Paper›PMID 19946041›Full record

ArticleRNA (New York, N.Y.)2009

AtnMat2, a nuclear-encoded maturase required for splicing of group-II introns in Arabidopsis mitochondria.

Ido Keren, Ayenachew Bezawork-Geleta, Max Kolton, Inbar Maayan, Eduard Belausov, Maggie Levy, Anahit Mett, David Gidoni, Felix Shaya, Oren Ostersetzer-Biran

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. EMP32 is required for theRNA biology · 2021
    Article
  12. Article
  13. The ChloroplastCells · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Rerouting of ribosomal proteins into splicing in plant organelles.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. The Mitochondrial Pentatricopeptide Repeat Protein PPR18 Is Required for theInternational journal of molecular sciences · 2020
    Article
  19. Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ido KerenVolcani Center, Institute of Plant Sciences, Agricultural Research Organization, Bet Dagan 50250, Israel.
Ayenachew Bezawork-Geleta
Max Kolton
Inbar Maayan
Eduard Belausov
Maggie Levy
Anahit Mett
David Gidoni
Felix Shaya
Oren Ostersetzer-Biran

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mitochondria (mt) in plants house about 20 group-II introns, which lie within protein-coding genes required in both organellar genome expression and respiration activities. While in nonplant systems the splicing of group-II introns is mediated by proteins encoded within the introns themselves (known as "maturases"), only a single maturase ORF (matR) has retained in the mitochondrial genomes in plants; however, its putative role(s) in the splicing of organellar introns is yet to be established. Clues to other proteins are scarce, but these are likely encoded within the nucleus as there are no obvious candidates among the remaining ORFs within the mtDNA. Intriguingly, higher plants genomes contain four maturase-related genes, which exist in the nucleus as self-standing ORFs, out of the context of their evolutionary-related group-II introns "hosts." These are all predicted to reside within mitochondria and may therefore act "in-trans" in the splicing of organellar-encoded introns. Here, we analyzed the intracellular locations of the four nuclear-encoded maturases in Arabidopsis and established the roles of one of these genes, At5g46920 (AtnMat2), in the splicing of several mitochondrial introns, including the single intron within cox2, nad1 intron2, and nad7 intron2.

Indexed as

IntronsRNA SplicingAmino Acid SequenceArabidopsisArabidopsis ProteinsCell NucleusIntracellular SpaceMitochondriaMolecular Sequence DataPhenotypeRNA-Directed DNA PolymeraseRNA, PlantTranscription, GeneticArabidopsis ProteinsnMat2 protein, ArabidopsisRNA-Directed DNA PolymeraseRNA, Plant

Identifiers

PMID19946041
PMCPMC2779688

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.