Evidence map›Paper›PMID 19941656›Full record

ArticleBMC genetics2009

Evidence for ADAR-induced hypermutation of the Drosophila sigma virus (Rhabdoviridae).

Jennifer A Carpenter, Liam P Keegan, Lena Wilfert, Mary A O'Connell, Francis M Jiggins

Open access · diamondAbstract read
In one paragraph

Article in BMC genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 43 citations in OpenAlex.

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  17. ADAR RNA editing below the backbone.RNA (New York, N.Y.) · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Jennifer A CarpenterInstitute of Evolutionary Biology, University of Edinburgh, West Mains Rd, Edinburgh EH9 3JT, UK. jenny@jennycarpenter.com
Liam P Keegan
Lena Wilfert
Mary A O'Connell
Francis M Jiggins
University of Cambridge · GBWestern General Hospital · GBUniversity of Edinburgh · GB

Funding

Medical Research Council MC_U127584490Wellcome Trust
6 · The paper itself

Abstract

backgroundADARs are RNA editing enzymes that target double stranded RNA and convert adenosine to inosine, which is read by translation machinery as if it were guanosine. Aside from their role in generating protein diversity in the central nervous system, ADARs have been implicated in the hypermutation of some RNA viruses, although why this hypermutation occurs is not well understood.

resultsHere we describe the hypermutation of adenosines to guanosines in the genome of the sigma virus--a negative sense RNA virus that infects Drosophila melanogaster. The clustering of these mutations and the context in which they occur indicates that they have been caused by ADARs. However, ADAR-editing of viral RNA is either rare or edited viral RNA are rapidly degraded, as we only detected evidence for editing in two of the 104 viral isolates we studied.

conclusionThis is the first evidence for ADARs targeting viruses outside of mammals, and it raises the possibility that ADARs could play a role in the antiviral defences of insects.

Indexed as

MutationAdenosine DeaminaseAnimalsBase SequenceDrosophila melanogasterGenome, ViralMolecular Sequence DataRhabdoviridaeRNA-Binding ProteinsRNA EditingRNA, ViralSequence AlignmentTranscription, GeneticADARB1 protein, humanAdenosine DeaminaseRNA-Binding ProteinsRNA, Viral

Identifiers

PMID19941656
PMCPMC2790459
OpenAlexW2153475539

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.