Evidence map›Paper›PMID 19938877›Full record

ArticleBiochemistry2010

Enhancing resistance to cephalosporins in class C beta-lactamases: impact of Gly214Glu in CMY-2.

Andrea Endimiani, Yohei Doi, Christopher R Bethel, Magdalena Taracila, Jennifer M Adams-Haduch, Alexandra O'Keefe, Andrea M Hujer, David L Paterson, Marion J Skalweit, Malcolm G P Page and 2 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Class C β-Lactamases: Molecular Characteristics.Clinical microbiology reviews · 2022
    Review
  3. Article
  4. The Class A β-Lactamase Produced byAntibiotics (Basel, Switzerland) · 2022
    Article
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  19. Carbapenems: past, present, and future.Antimicrobial agents and chemotherapy · 2011
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Andrea EndimianiResearch Service, Louis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, Ohio 44106, USA.
Yohei Doi
Christopher R Bethel
Magdalena Taracila
Jennifer M Adams-Haduch
Alexandra O'Keefe
Andrea M Hujer
David L Paterson
Marion J Skalweit
Malcolm G P Page
Sarah M Drawz
Robert A Bonomo
Case Western Reserve University · USUniversity of Pittsburgh Medical Center · USLouis Stokes Cleveland VA Medical Center · USBasilea Pharmaceutica (Switzerland) · CHUniversity of Queensland · AUUniversity School · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007250 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI HUANG, ALEX YEE-CHEN · 1985 to 2023
$33.4M
Understanding ceftazidime resistance in SHV B-LactamasesR01AI063517 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI BONOMO, ROBERT A. · 2005 to 2023
$4.9M
TRAINING IN AIDS &MOLECULAR MICROBIOLOGY/EPIDEMIOLOGYT32AI007333 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MELLORS, JOHN W · 1988 to 2009
$1.3M
NIAID NIH HHS R01 AI063517NIAID NIH HHS R01-AI063517NIAID NIH HHS T32 AI007333NIGMS NIH HHS T32 GM007250NIGMS NIH HHS T32GM07250
6 · The paper itself

Abstract

The biochemical properties of CMY-32, a class C enzyme possessing a single-amino acid substitution in the Omega loop (Gly214Glu), were compared to those of the parent enzyme, CMY-2, a widespread class C beta-lactamase. In parallel with our microbiological characterization, the Gly214Glu substitution in CMY-32 reduced catalytic efficiency (k(cat)/K(m)) by 50-70% against "good" substrates (i.e., cephalothin) while increasing k(cat)/K(m) against "poor" substrates (i.e., cefotaxime). Additionally, CMY-32 was more susceptible to inactivation by sulfone beta-lactamase inhibitors (i.e., sulbactam and tazobactam) than CMY-2. Timed electrospray ionization mass spectrometry (ESI-MS) analysis of the reaction of CMY-2 and CMY-32 with different substrates and inhibitors suggested that both beta-lactamases formed similar intermediates during catalysis and inactivation. We next showed that the carbapenems (imipenem, meropenem, and doripenem) form long-lived acyl-enzyme intermediates and present evidence that there is beta-lactamase-catalyzed elimination of the C(6) hydroxyethyl substituent. Furthermore, we discovered that the monobactam aztreonam and BAL29880, a new beta-lactamase inhibitor of the monobactam class, inactivate CMY-2 and CMY-32 by forming an acyl-enzyme intermediate that undergoes elimination of SO(3)(2-). Molecular modeling and dynamics simulations suggest that the Omega loop is more constrained in CMY-32 than CMY-2. Our model also proposes that Gln120 adopts a novel conformation in the active site while new interactions form between Glu214 and Tyr221, thus explaining the increased level of cefotaxime hydrolysis. When it is docked in the active site, we observe that BAL29880 exploits contacts with highly conserved residues Lys67 and Asn152 in CMY-2 and CMY-32. These findings highlight (i) the impact of single-amino acid substitutions on protein evolution in clinically important AmpC enzymes and (ii) the novel insights into the mechanisms by which carbapenems and monobactams interact with CMY-2 and CMY-32 beta-lactamases.

Indexed as

beta-Lactamase InhibitorsCephalosporin ResistanceDrug Resistance, Multiple, BacterialAmino Acid Substitutionbeta-LactamasesCatalysisCrystallography, X-RayEscherichia coliEscherichia coli ProteinsGlutamic AcidGlycineMicrobial Sensitivity TestsModels, MolecularMolecular Sequence Databeta-lactamase CMY-2beta-lactamase CMY-32, E colibeta-Lactamase Inhibitorsbeta-LactamasesEscherichia coli ProteinsGlutamic AcidGlycine

Identifiers

PMID19938877
PMCPMC4018810
OpenAlexW2016215170

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.