Evidence map›Paper›PMID 19937638›Full record

ArticleAnatomical record (Hoboken, N.J. : 2007)2010

Tessellation analysis of glomerular spatial arrangement in mice with heritable renal hypoplasia.

Brittany Wong, Michael L Farrell, Shiming Yang, Tracey Freitas, Scott Lozanoff

Open access · bronzeAbstract read
In one paragraph

Article in Anatomical record (Hoboken, N.J. : 2007), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brittany WongDepartment of Anatomy, Biochemistry and Physiology, University of Hawaii School of Medicine, Honolulu, Hawaii.
Michael L Farrell
Shiming Yang
Tracey Freitas
Scott Lozanoff
University of Hawaii System · US

Funding

Gene Discovery in Heritable Renal HypodysplasiaR01DK064752 · NIDDK · UNIVERSITY OF HAWAII AT MANOA · PI LOZANOFF, SCOTT · 2003 to 2007
$791k
NIDDK NIH HHS 1R01 DK064752NIDDK NIH HHS R01 DK064752
6 · The paper itself

Abstract

Renal hypoplasia results from an insufficient kidney volume caused, in part, by a deficient number of glomeruli. The purpose of this study was to apply tessellation analysis to determine whether glomerular point patterns differed between adult normal (WT) and mutant (Br) mice with heritable renal hypoplasia and to delineate a spatial distribution accounting for the observed patterns. Kidneys from adult WT and Br mice were collected, processed with routine light histology and representative transverse sections were photographed. Cortical area and perimeter were calculated from traced tissue contours and glomeruli were identified and digitized. Voronoi tessellations were constructed and average parameters for Voronoi polygon number, area, perimeter and edge counts as well as spatial metrics comprising nearest neighbor and centroidal distances were calculated and compared. Point distributions were simulated by randomizing glomerular coordinates from each section and plotting the new points utilizing uniform random, Gaussian random, or isotropic functions. Average nearest neighbor distances were generated for each specimen and ranked with respect to corresponding values generated from 1,000 iterations for each simulated set. Results showed that WT and Br were significantly different for each parameter suggesting that WT kidneys possessed more glomeruli, but these were less clustered compared to Br. Simulations suggested that WT and Br demonstrated similar, but not identical, underlying glomerular spatial distributions. Defective gene expression in Br is important for determining glomerular number and the defective pattern likely results from a heterochronic disturbance consisting of a truncated growth trajectory during embryonic kidney development.

Indexed as

AnimalsDisease Models, AnimalGenetic Predisposition to DiseaseHomeodomain ProteinsKidney DiseasesKidney GlomerulusMiceMice, Inbred C3HMice, Mutant StrainsModels, BiologicalModels, StatisticalMutationNormal DistributionPedigreePhenotypeReproducibility of ResultsHomeodomain ProteinsSix2 protein, mouseTranscription Factors

Identifiers

PMID19937638
PMCPMC3162479
OpenAlexW2046249128

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.