Evidence map›Paper›PMID 19933152›Full record

ArticleGenes & development2009

Satb1 and Satb2 regulate embryonic stem cell differentiation and Nanog expression.

Fabio Savarese, Amparo Dávila, Robert Nechanitzky, Inti De La Rosa-Velazquez, Carlos F Pereira, Rudolf Engelke, Keiko Takahashi, Thomas Jenuwein, Terumi Kohwi-Shigematsu, Amanda G Fisher and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 129 citations in OpenAlex.

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  8. Regional specific differentiation of integumentary organs: SATB2 is involved in α- and β-keratin gene cluster switching in the chicken.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Article
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  11. Transcriptional regulation ofFrontiers in cell and developmental biology · 2022
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  20. Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Fabio SavareseMax Planck Institute of Immunobiology, Department of Cellular and Molecular Immunology, 79108 Freiburg, Germany.
Amparo Dávila
Robert Nechanitzky
Inti De La Rosa-Velazquez
Carlos F Pereira
Rudolf Engelke
Keiko Takahashi
Thomas Jenuwein
Terumi Kohwi-Shigematsu
Amanda G Fisher
Rudolf Grosschedl
Max Planck Institute of Immunobiology and Epigenetics · DELawrence Berkeley National Laboratory · USImperial College London · GBMRC London Institute of Medical Sciences · GB

Funding

Medical Research Council MC_U120027516
6 · The paper itself

Abstract

Satb1 and the closely related Satb2 proteins regulate gene expression and higher-order chromatin structure of multigene clusters in vivo. In examining the role of Satb proteins in murine embryonic stem (ES) cells, we find that Satb1(-/-) cells display an impaired differentiation potential and augmented expression of the pluripotency determinants Nanog, Klf4, and Tbx3. Metastable states of self-renewal and differentiation competence have been attributed to heterogeneity of ES cells in the expression of Nanog. Satb1(-/-) cultures have a higher proportion of Nanog(high) cells, and an increased potential to reprogram human B lymphocytes in cell fusion experiments. Moreover, Satb1-deficient ES cells show an increased expression of Satb2, and we find that forced Satb2 expression in wild-type ES cells antagonizes differentiation-associated silencing of Nanog and enhances the induction of NANOG in cell fusions with human B lymphocytes. An antagonistic function of Satb1 and Satb2 is also supported by the almost normal differentiation potential of Satb1(-/-)Satb2(-/-) ES cells. Taken together with the finding that both Satb1 and Satb2 bind the Nanog locus in vivo, our data suggest that the balance of Satb1 and Satb2 contributes to the plasticity of Nanog expression and ES cell pluripotency.

Indexed as

Cell DifferentiationGene Expression Regulation, DevelopmentalAnimalsB-LymphocytesCell LineEmbryonic Stem CellsHomeodomain ProteinsHumansKruppel-Like Factor 4Matrix Attachment Region Binding ProteinsMiceNanog Homeobox ProteinTranscription FactorsHomeodomain ProteinsKLF4 protein, humanKlf4 protein, mouseKruppel-Like Factor 4Matrix Attachment Region Binding ProteinsNanog Homeobox ProteinNANOG protein, humanNanog protein, mouseSatb1 protein, mouseSATB2 protein, mouseTranscription Factors

Identifiers

PMID19933152
PMCPMC2779756
OpenAlexW2158487422

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.