Evidence map›Paper›PMID 19933149›Full record

ArticleGenes & development2009

Nonallelic transvection of multiple imprinted loci is organized by the H19 imprinting control region during germline development.

Kuljeet Singh Sandhu, Chengxi Shi, Mikael Sjölinder, Zhihu Zhao, Anita Göndör, Liang Liu, Vijay K Tiwari, Sylvain Guibert, Lina Emilsson, Marta P Imreh and 1 more

Abstract read
In one paragraph

Article in Genes & development, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Article
  2. Genomic context sensitizes regulatory elements to genetic disruption.bioRxiv : the preprint server for biology · 2024
    Article
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  13. Review
  14. Article
  15. Article
  16. Pairing and anti-pairing: a balancing act in the diploid genome.Current opinion in genetics & development · 2016
    Review
  17. Genetics of Common Endocrine Disease: The Present and the Future.The Journal of clinical endocrinology and metabolism · 2016
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kuljeet Singh SandhuDepartment of Development and Genetics, Evolution Biology Centre, Uppsala University, S-752 36 Uppsala, Sweden.
Chengxi Shi
Mikael Sjölinder
Zhihu Zhao
Anita Göndör
Liang Liu
Vijay K Tiwari
Sylvain Guibert
Lina Emilsson
Marta P Imreh
Rolf Ohlsson

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent observations highlight that the mammalian genome extensively communicates with itself via long-range chromatin interactions. The causal link between such chromatin cross-talk and epigenetic states is, however, poorly understood. We identify here a network of physically juxtaposed regions from the entire genome with the common denominator of being genomically imprinted. Moreover, CTCF-binding sites within the H19 imprinting control region (ICR) not only determine the physical proximity among imprinted domains, but also transvect allele-specific epigenetic states, identified by replication timing patterns, to interacting, nonallelic imprinted regions during germline development. We conclude that one locus can directly or indirectly pleiotropically influence epigenetic states of multiple regions on other chromosomes with which it interacts.

Indexed as

Gene Expression Regulation, DevelopmentalAllelesAnimalsCells, CulturedEmbryonic Stem CellsFemaleGenomic ImprintingGerm CellsMaleMiceMice, Inbred C57BLRNA, Long NoncodingRNA, UntranslatedH19 long non-coding RNARNA, Long NoncodingRNA, Untranslated

Identifiers

PMID19933149
PMCPMC2779760

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.