Evidence map›Paper›PMID 19932103›Full record

ReviewFEBS letters2010

The T box mechanism: tRNA as a regulatory molecule.

Nicholas J Green, Frank J Grundy, Tina M Henkin

Open access · bronzeAbstract readReview
In one paragraph

Review in FEBS letters, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed, 1 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 1 synthesis or guideline pooled it, 146 citations in OpenAlex.

  1. Pooled it
  2. Antimicrobial agents and chemotherapy · 2026
    Article
  3. Review
  4. Article
  5. Targeting Gene Transcription Prevents Antibiotic Resistance.Antibiotics (Basel, Switzerland) · 2025
    Review
  6. Article
  7. Article
  8. The serum small non-coding RNA (SncRNA) landscape as a molecular biomarker of age associated muscle dysregulation and insulin resistance in older adults.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Article
  9. Review
  10. Discovering riboswitches: the past and the future.Trends in biochemical sciences · 2023
    Review
  11. Article
  12. A Riboswitch-Driven Era of New Antibacterials.Antibiotics (Basel, Switzerland) · 2022
    Review
  13. Key players in regulatory RNA realm of bacteria.Biochemistry and biophysics reports · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Nicholas J GreenDepartment of Microbiology, Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA.
Frank J Grundy
Tina M Henkin
The Ohio State University · US

Funding

REGULATION OF BACILLUS SUBTILIS TRNA SYNTHETASE GENESR01GM047823 · NIGMS · OHIO STATE UNIVERSITY · PI HENKIN, TINA M. · 1994 to 2019
$4.8M
NIGMS NIH HHS R01 GM047823NIGMS NIH HHS R01-GM47823
6 · The paper itself

Abstract

The T box mechanism is widely used in Gram-positive bacteria to regulate expression of aminoacyl-tRNA synthetase genes and genes involved in amino acid biosynthesis and uptake. Binding of a specific uncharged tRNA to a riboswitch element in the nascent transcript causes a structural change in the transcript that promotes expression of the downstream coding sequence. In most cases, this occurs by stabilization of an antiterminator element that competes with formation of a terminator helix. Specific tRNA recognition by the nascent transcript results in increased expression of genes important for tRNA aminoacylation in response to decreased pools of charged tRNA.

Indexed as

Gene Expression Regulation, BacterialGene Expression Regulation, EnzymologicAmino Acyl-tRNA SynthetasesBacillus subtilisRNA, TransferTranscription, GeneticAmino Acyl-tRNA SynthetasesRNA, Transfer

Identifiers

PMID19932103
PMCPMC2794906
OpenAlexW2003026778

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.