Evidence map›Paper›PMID 19928859›Full record

ArticleJournal of medicinal chemistry2010

Design of O-acetylserine sulfhydrylase inhibitors by mimicking nature.

Enea Salsi, Alexander S Bayden, Francesca Spyrakis, Alessio Amadasi, Barbara Campanini, Stefano Bettati, Tetyana Dodatko, Pietro Cozzini, Glen E Kellogg, Paul F Cook and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 84 citations in OpenAlex.

  1. Serine Acetyltransferase fromInternational journal of molecular sciences · 2026
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  6. Review
  7. Review
  8. Review
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  10. Article
  11. Identification of Anti-Frontiers in microbiology · 2020
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Inhibition of O-acetylserine sulfhydrylase by fluoroalanine derivatives.Journal of enzyme inhibition and medicinal chemistry · 2018
    Article
  18. Article
  19. Article
  20. Unraveling the essential role of CysK in CDI toxin activation.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Enea SalsiDepartment of Biochemistry and Molecular Biology, University of Parma, Italy. andrea.mozzarelli@unipr.it
Alexander S Bayden
Francesca Spyrakis
Alessio Amadasi
Barbara Campanini
Stefano Bettati
Tetyana Dodatko
Pietro Cozzini
Glen E Kellogg
Paul F Cook
Steven L Roderick
Andrea Mozzarelli
Institute of Biostructure and Bioimaging · ITAlbert Einstein College of Medicine · USVirginia Commonwealth University · USUniversity of Oklahoma · USUniversity of Parma · IT

Funding

New Hydropathy-Based computer Tools for Drug DiscoveryR01GM071894 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI KELLOGG, GLEN EUGENE · 2005 to 2009
$1.1M
NIGMS NIH HHS GM071894NIGMS NIH HHS R01 GM071894
6 · The paper itself

Abstract

The inhibition of cysteine biosynthesis in prokaryotes and protozoa has been proposed to be relevant for the development of antibiotics. Haemophilus influenzae O-acetylserine sulfhydrylase (OASS), catalyzing l-cysteine formation, is inhibited by the insertion of the C-terminal pentapeptide (MNLNI) of serine acetyltransferase into the active site. Four-hundred MNXXI pentapeptides were generated in silico, docked into OASS active site using GOLD, and scored with HINT. The terminal P5 Ile accounts for about 50% of the binding energy. Glu or Asp at position P4 and, to a lesser extent, at position P3 also significantly contribute to the binding interaction. The predicted affinity of 14 selected pentapeptides correlated well with the experimentally determined dissociation constants. The X-ray structure of three high affinity pentapeptide-OASS complexes were compared with the docked poses. These results, combined with a GRID analysis of the active site, allowed us to define a pharmacophoric scaffold for the design of peptidomimetic inhibitors.

Indexed as

Drug DesignCatalytic DomainComputational BiologyComputer SimulationCrystallography, X-RayCysteine SynthaseEnzyme InhibitorsHaemophilus influenzaeModels, ChemicalModels, MolecularMolecular StructureOligopeptidesStructure-Activity RelationshipCysteine SynthaseEnzyme InhibitorsOligopeptides

Identifiers

PMID19928859
PMCPMC2804909
OpenAlexW2022339517

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.