Evidence map›Paper›PMID 19927126›Full record

ArticleThe EMBO journal2010

Molecular mechanism of alpha2beta1 integrin interaction with human echovirus 1.

Johanna Jokinen, Daniel J White, Maria Salmela, Mikko Huhtala, Jarmo Käpylä, Kalle Sipilä, J Santeri Puranen, Liisa Nissinen, Pasi Kankaanpää, Varpu Marjomäki and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
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  5. Review
  6. Article
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  8. Article
  9. Article
  10. Can the SARS-CoV-2 Spike Protein Bind Integrins Independent of the RGD Sequence?Frontiers in cellular and infection microbiology · 2021
    Article
  11. Article
  12. Article
  13. Article
  14. Review
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  16. Article
  17. The integrin adhesome: from genes and proteins to human disease.Nature reviews. Molecular cell biology · 2014
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Johanna JokinenDepartment of Biochemistry and Food Chemistry, University of Turku, Turku, Finland.
Daniel J White
Maria Salmela
Mikko Huhtala
Jarmo Käpylä
Kalle Sipilä
J Santeri Puranen
Liisa Nissinen
Pasi Kankaanpää
Varpu Marjomäki
Timo Hyypiä
Mark S Johnson
Jyrki Heino
University of Turku · FIÅbo Akademi University · FIUniversity of Jyväskylä · FIResearch Council of Finland · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conformational activation increases the affinity of integrins to their ligands. On ligand binding, further changes in integrin conformation elicit cellular signalling. Unlike any of the natural ligands of alpha2beta1 integrin, human echovirus 1 (EV1) seemed to bind more avidly a 'closed' than an activated 'open' form of the alpha2I domain. Furthermore, a mutation E336A in the alpha2 subunit, which inactivated alpha2beta1 as a collagen receptor, enhanced alpha2beta1 binding to EV1. Thus, EV1 seems to recognize an inactive integrin, and not even the virus binding could trigger the conformational activation of alpha2beta1. This was supported by the fact that the integrin clustering by EV1 did not activate the p38 MAP kinase pathway, a signalling pathway that was shown to be dependent on E336-related conformational changes in alpha2beta1. Furthermore, the mutation E336A did neither prevent EV1 induced and alpha2beta1 mediated protein kinase C activation nor EV1 internalization. Thus, in its entry strategy EV1 seems to rely on the activation of signalling pathways that are dependent on alpha2beta1 clustering, but do not require the conformational regulation of the receptor.

Indexed as

Amino Acid SubstitutionAnimalsBinding SitesCell LineChlorocebus aethiopsCHO CellsCricetinaeCricetulusEnterovirus B, HumanHumansIntegrin alpha2beta1In Vitro TechniquesModels, MolecularMutagenesis, Site-Directedp38 Mitogen-Activated Protein KinasesProtein ConformationIntegrin alpha2beta1p38 Mitogen-Activated Protein KinasesReceptors, VirusRecombinant Proteins

Identifiers

PMID19927126
PMCPMC2808374
OpenAlexW2120762331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.