Evidence map›Paper›PMID 19925827›Full record

ArticleJournal of neuroscience methods2010

A combined method of laser capture microdissection and X-Gal histology to analyze gene expression in c-Fos-specific neurons.

Bumsup Kwon, Thomas A Houpt

Open access · greenAbstract read
In one paragraph

Article in Journal of neuroscience methods, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. FACS identifies unique cocaine-induced gene regulation in selectively activated adult striatal neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Bumsup KwonDepartment of Biological Science and Program in Neuroscience, Florida State University, Tallahassee, FL 32306, USA.
Thomas A Houpt
Florida State University · US

Funding

MOLECULAR MECHANISMS OF CONDITIONED TASTE AVERSIONR01DC003198 · NIDCD · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI HOUPT, THOMAS A · 1996 to 2004
$1.0M
NIDCD NIH HHS R01 DC003198NIDCD NIH HHS R01DC03198
6 · The paper itself

Abstract

c-Fos is a member of the activator protein 1 family that regulates transcription of target genes. c-Fos is transiently induced in specific regions of the brain after a variety of external stimuli including learning and memory formation. Analysis of gene expression in c-Fos-expressing cells of the brain may help identify target genes that play important roles in synaptic strength or neuronal morphology. In the present study, we developed a combined method of laser capture microdissection and 5-bromo-4-chloro-3-indoly-beta-D-galactopyranosidase (X-Gal) histology to analyze gene expression in stimulus-induced c-Fos-positive cells. Using transgenic mice carrying a c-fos-lacZ fusion gene, c-Fos-positive cells were easily identified by measuring of beta-galactosidase (beta-Gal) activity. To establish the fidelity of the reporter transgene, the time course of endogenous c-Fos and the c-fos-lacZ transgene expression in the amygdala induced by LiCl administration was investigated by immunohistochemistry and X-Gal staining. LiCl increased the numbers of c-Fos- and beta-Gal-positive cells in the central and basolateral amygdala of the transgenic mice. To ensure that RNA was preserved in X-Gal stained tissue sections, different fixations were examined, with the conclusion that ethanol fixation was best for both RNA preservation and X-Gal staining quality. Finally, in combining X-Gal staining, single-cell LCM and RT-PCR, we confirmed mRNA expression of endogenous c-fos and beta-actin genes in LiCl-induced beta-Gal-positive cells in the CeA, cortex and hippocampus. Combining LCM and transgenic reporter genes provides a powerful tool with which to investigate tissue- or cell-specific gene expression.

Indexed as

Gene ExpressionGenes, fosGenetic TechniquesAnimalsbeta-GalactosidaseBrainGalactosidesHistological TechniquesIndolesLac OperonLasersMaleMiceMice, TransgenicMicrodissectionNeurons5-bromo-4-chloro-3-indolyl beta-galactosidebeta-GalactosidaseGalactosidesIndolesProto-Oncogene Proteins c-fosRNARNA, Messenger

Identifiers

PMID19925827
PMCPMC2829768
OpenAlexW2017762183

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.