Evidence map›Paper›PMID 19924793›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2009

Downstream targets of GATA3 in the vestibular sensory organs of the inner ear.

David M Alvarado, Rose Veile, Judith Speck, Mark Warchol, Michael Lovett

Open access · bronzeAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Hair cell generation by notch inhibition in the adult mammalian cristae.Journal of the Association for Research in Otolaryngology : JARO · 2013
    Article
  7. Notch signaling in mammalian hair cell regeneration.Trends in developmental biology · 2013
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

David M AlvaradoDivision of Human Genetics, Department of Genetics, Washington University School of Medicine, St Louis, Missouri 63110, USA.
Rose Veile
Judith Speck
Mark Warchol
Michael Lovett
Central Institute for the Deaf · USWashington University in St. Louis · US

Funding

MECHANISMS OF SENSORY REGENERATIONR01DC006283 · NIDCD · WASHINGTON UNIVERSITY · PI WARCHOL, MARK · 2004 to 2025
$6.8M
Gene Expression Profiling of the Development Inner EarR01DC005632 · NIDCD · WASHINGTON UNIVERSITY · PI LOVETT, MICHAEL · 2003 to 2006
$1.2M
NIDCD NIH HHS R01 DC005632NIDCD NIH HHS R01DC005632NIDCD NIH HHS R01 DC006283
6 · The paper itself

Abstract

Haploinsufficiency for the transcription factor GATA3 leads to hearing loss in humans. It is expressed throughout the auditory sensory epithelium (SE). In the vestibular organs, GATA3 is limited to the striola reversal zone of the utricle. Stereocilia orientation shifts 180 degrees at this region, which contains morphologically distinct type-I hair cells. The striola is conserved in all amniotes, its function is unknown, and GATA3 is the only known marker of the reversal zone. To identify downstream targets of GATA3 that might point to striolar function, we measured gene expression differences between striolar and extra-striolar SE. These were compared with profiles after GATA3 RNAi and GATA3 over-expression. We identified four genes (BMP2, FKHL18, LMO4, and MBNL2) that consistently varied with GATA3. Two of these (LMO4 and MBNL2) were shown to be direct targets of GATA3 by ChIP. Our results suggest that GATA3 impacts WNT signaling in this region of the sensory macula.

Indexed as

Gene Expression RegulationAnimalsCells, CulturedChickensEar, InnerGATA3 Transcription FactorGene Expression ProfilingHair Cells, VestibularOligonucleotide Array Sequence AnalysisSaccule and UtricleTransfectionVestibule, LabyrinthWnt ProteinsGATA3 Transcription FactorWnt Proteins

Identifiers

PMID19924793
PMCPMC3086404
OpenAlexW2041348453

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.