Evidence map›Paper›PMID 19923211›Full record

ArticleThe Journal of biological chemistry2010

Crystal structures of Trypanosoma brucei sterol 14alpha-demethylase and implications for selective treatment of human infections.

Galina I Lepesheva, Hee-Won Park, Tatiana Y Hargrove, Benoit Vanhollebeke, Zdzislaw Wawrzak, Joel M Harp, Munirathinam Sundaramoorthy, W David Nes, Etienne Pays, Minu Chaudhuri and 2 more

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Identification of Potent and Selective Inhibitors ofJournal of medicinal chemistry · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Oxalactam A, a Novel Macrolactam with Potent Anti-Molecules (Basel, Switzerland) · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Galina I LepeshevaDepartment of Biochemistry, Vanderbilt University, Nashville, Tennessee 37232, USA. galina.i.lepesheva@vanderbilt.edu
Hee-Won Park
Tatiana Y Hargrove
Benoit Vanhollebeke
Zdzislaw Wawrzak
Joel M Harp
Munirathinam Sundaramoorthy
W David Nes
Etienne Pays
Minu Chaudhuri
Fernando Villalta
Michael R Waterman

Funding

Structural Biology Facility CoreP30ES000267 · NIEHS · VANDERBILT UNIVERSITY · PI GUENGERICH, F PETER · 1985 to 2014
$20.3M
Structural Requirements for Sterol 14alpha-DemethylasesR01GM067871 · NIGMS · VANDERBILT UNIVERSITY · PI LEPESHEVA, GALINA I · 2004 to 2023
$7.2M
Mitochondrial Protein Import in Trypanosoma bruceiSC1GM081146 · NIGMS · MEHARRY MEDICAL COLLEGE · PI CHAUDHURI, MINU · 2007 to 2014
$2.6M
Molecular Analysis of Trypanosome InfectionSC1AI080580 · NIAID · MEHARRY MEDICAL COLLEGE · PI VILLALTA, FERNANDO · 2008 to 2010
$1.1M
NIAID NIH HHS AI080580NIAID NIH HHS SC1 AI080580NIEHS NIH HHS P30 ES000267NIEHS NIH HHS P30ES00267NIGMS NIH HHS GM 067871NIGMS NIH HHS GM 081146NIGMS NIH HHS R01 GM067871NIGMS NIH HHS SC1 GM081146
6 · The paper itself

Abstract

Sterol 14alpha-demethylase (14DM, the CYP51 family of cytochrome P450) is an essential enzyme in sterol biosynthesis in eukaryotes. It serves as a major drug target for fungal diseases and can potentially become a target for treatment of human infections with protozoa. Here we present 1.9 A resolution crystal structures of 14DM from the protozoan pathogen Trypanosoma brucei, ligand-free and complexed with a strong chemically selected inhibitor N-1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethyl)-4-(5-phenyl-1,3,4-oxadi-azol-2-yl)benzamide that we previously found to produce potent antiparasitic effects in Trypanosomatidae. This is the first structure of a eukaryotic microsomal 14DM that acts on sterol biosynthesis, and it differs profoundly from that of the water-soluble CYP51 family member from Mycobacterium tuberculosis, both in organization of the active site cavity and in the substrate access channel location. Inhibitor binding does not cause large scale conformational rearrangements, yet induces unanticipated local alterations in the active site, including formation of a hydrogen bond network that connects, via the inhibitor amide group fragment, two remote functionally essential protein segments and alters the heme environment. The inhibitor binding mode provides a possible explanation for both its functionally irreversible effect on the enzyme activity and its selectivity toward the 14DM from human pathogens versus the human 14DM ortholog. The structures shed new light on 14DM functional conservation and open an excellent opportunity for directed design of novel antiparasitic drugs.

Indexed as

Cytochrome P-450 Enzyme InhibitorsAmino Acid SequenceBenzamidesBiocatalysisCrystallography, X-RayCytochrome P-450 Enzyme SystemDrug DesignEnzyme InhibitorsHumansLigandsMicrosomesModels, MolecularProtein ConformationSterol 14-DemethylaseSterolsSubstrate SpecificitybenzamideBenzamidesCYP51A1 protein, humanCytochrome P-450 Enzyme InhibitorsCytochrome P-450 Enzyme SystemEnzyme InhibitorsLigandsSterol 14-DemethylaseSterolsTrypanocidal Agents

Identifiers

PMID19923211
PMCPMC2804335

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.