Evidence map›Paper›PMID 19923182›Full record

ArticleJournal of virology2010

Theiler's murine encephalomyelitis virus L* amino acid position 93 is important for virus persistence and virus-induced demyelination.

Spyridon Stavrou, Gleb Baida, Ekaterina Viktorova, Ghanashyam Ghadge, Vadim I Agol, Raymond P Roos

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Ribosomal frameshifting into an overlapping gene in the 2B-encoding region of the cardiovirus genome.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  4. Article
  5. Article
  6. Viral security proteins: counteracting host defences.Nature reviews. Microbiology · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Spyridon StavrouDepartment of Neurology, The University of Chicago Medical Center, 5841 S. Maryland Ave., Chicago, IL 60637, USA.
Gleb Baida
Ekaterina Viktorova
Ghanashyam Ghadge
Vadim I Agol
Raymond P Roos
Chumakov Institute of Poliomyelitis and Viral Encephalitides · RUUniversity of Chicago Medical Center · US

Funding

THEILERS VIRUS DEMYELINATIONR01NS037958 · NINDS · UNIVERSITY OF CHICAGO · PI ROOS, RAYMOND PHILIP · 1998 to 2009
$2.6M
NINDS NIH HHS 1R01 463 NS37958-07NINDS NIH HHS R01 NS037958
6 · The paper itself

Abstract

The DA strain and other members of the TO subgroup of Theiler's murine encephalomyelitis virus (TMEV) induce a persistent central nervous system infection associated with an inflammatory white matter demyelinating disease. TO subgroup strains synthesize an 18-kDa protein, L*, out of frame with the polyprotein from an initiation codon 13 nucleotides downstream from the polyprotein's AUG codon. We previously generated a mutant virus from our infectious DA full-length clone that has a change of the L* AUG codon to ACG (with no change in the polyprotein's amino acid sequence). Studies of this mutant virus showed that L* was key to the TO subgroup phenotype because the mutant had a decreased ability to persist and demyelinate. This work was initially called into question because a similar mutant derived from a different full-length DA infectious clone persisted and demyelinated similarly to wild-type DA virus (O. van Eyll and T. Michiels, J. Virol. 74:9071-9077, 2000). We now report that (i) the sequence of the L* coding region differs in the two infectious clones, resulting in a Ser or Leu as the predicted amino acid at position 93 of L* (with no change in the polyprotein's amino acid sequence), (ii) the difference in this amino acid is key to the phenotypic differences between the two mutants, and (iii) the change in amino acid 93 may affect L* phosphorylation. It is of interest that this amino acid only appears critical in determining the virus phenotype when L* is present in a significantly reduced amount (i.e., following translation from an ACG initiating codon).

Indexed as

AnimalsBase SequenceBlotting, WesternCell LineCodonCricetinaeDemyelinating DiseasesDNA PrimersMiceTheilovirusViral ProteinsCodonDNA PrimersViral Proteins

Identifiers

PMID19923182
PMCPMC2812333
OpenAlexW2130946886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.