Evidence map›Paper›PMID 19921347›Full record

Trial reportNeurotoxicity research2011

Correlations of gene expression with blood lead levels in children with autism compared to typically developing controls.

Yingfang Tian, Peter G Green, Boryana Stamova, Irva Hertz-Picciotto, Isaac N Pessah, Robin Hansen, Xiaowei Yang, Jeffrey P Gregg, Paul Ashwood, Glen Jickling and 2 more

Open access · hybridAbstract readComparative StudyRandomized Controlled Trial
In one paragraph

Trial report in Neurotoxicity research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 4 pooled it
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 4 syntheses or guidelines pooled it, 71 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Blood transcriptomic comparison of individuals with and without autism spectrum disorder: A combined-samples mega-analysis.American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics · 2017
    Pooled it
  4. Pooled it
  5. Review
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  19. Factors associated with blood lead concentrations of children in Jamaica.Journal of environmental science and health. Part A, Toxic/hazardous substances & environmental engineering · 2015
    Article
  20. Blood lead concentrations in Jamaican children with and without autism spectrum disorder.International journal of environmental research and public health · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yingfang TianDepartment of Neurology, University of California at Davis, Sacramento, CA 95817, USA. yftian@ucdavis.edu
Peter G Green
Boryana Stamova
Irva Hertz-Picciotto
Isaac N Pessah
Robin Hansen
Xiaowei Yang
Jeffrey P Gregg
Paul Ashwood
Glen Jickling
Judy Van de Water
Frank R Sharp
UC Davis Children's Hospital · USUniversity of California, Davis · USUniversity of California Davis Medical Center · US

Funding

THE CHARGE STUDY: CHILDHOOD AUTISM RISKS FROM GENETICS AND THE ENVIRONMENT - ADMINISTRATIVE SUPPLEMENTR01ES015359 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI HERTZ-PICCIOTTO, IRVA · 2007 to 2019
$13.8M
UC Davis Center for Children's Environmental Health (CCEH)P01ES011269 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI VAN DE WATER, JUDY A. · 2001 to 2018
$12.5M
NIEHS NIH HHS 1P01 ES11269NIEHS NIH HHS 1 R01 ES015359NIEHS NIH HHS P01 ES011269NIEHS NIH HHS R01 ES015359
6 · The paper itself

Abstract

The objective of this study was to examine the correlation between gene expression and lead (Pb) levels in blood in children with autism (AU, n = 37) compared to typically developing controls (TD, n = 15). We postulated that, though lead levels did not differ between the groups, AU children might metabolize lead differently compared to TD children. RNA was isolated from blood and processed on Affymetrix microarrays. Separate analyses of covariance (ANCOVA) corrected for age and gender were performed for TD, AU, and all subjects (AU + TD). To reduce false positives, only genes that overlapped these three ANCOVAs were considered. Thus, 48 probe sets correlated with lead levels in both AU and TD subjects and were significantly different between the groups (p(Diagnosis x log₂Pb) < 0.05). These genes were related mainly to immune and inflammatory processes, including MHC Class II family members and CD74. A large number (n = 791) of probe sets correlated (P ≤ 0.05) with lead levels in TD but not in AU subjects; and many probe sets (n = 162) correlated (P ≤ 0.05) with lead levels in AU but not in TD subjects. Only 30 probe sets correlated (P ≤ 0.05) with lead levels in a similar manner in the AU and TD groups. These data show that AU and TD children display different associations between transcript levels and low levels of lead. We postulate that this may relate to the underlying genetic differences between the two groups, though other explanations cannot be excluded.

Indexed as

Gene Expression Regulation, DevelopmentalAutistic DisorderChild DevelopmentChild, PreschoolEnvironmental ExposureFemaleGene Regulatory NetworksHumansLeadMaleOligonucleotide Array Sequence AnalysisLead

Identifiers

PMID19921347
PMCPMC3006638
OpenAlexW1986315225

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.