Evidence map›Paper›PMID 19920120›Full record

ReviewNucleic acids research2010

A profusion of upstream open reading frame mechanisms in polyamine-responsive translational regulation.

Ivaylo P Ivanov, John F Atkins, Antony J Michael

Open access · goldAbstract readReview
In one paragraph

Review in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Transcriptional repression ofPlant direct · 2024
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Polyamine Homeostasis in Development and Disease.Medical sciences (Basel, Switzerland) · 2021
    Review
  17. Review
  18. EcoSal Plus · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 3 countries.

Ivaylo P IvanovBioSciences Institute, University College Cork, Cork, Ireland and Department of Human Genetics, University of Utah, Salt Lake City, UT 84112-5330, USA.
John F Atkins
Antony J Michael
Norwich Research Park · GBUniversity College Cork · IE

Funding

The range of recoding and analysis of a 50 nt bypass to probe ribosomal functionR01GM079523 · NIGMS · UNIVERSITY OF UTAH · PI ATKINS, JOHN F. · 2007 to 2010
$1.3M
Biotechnology and Biological Sciences Research Council BB/E024467/1NIGMS NIH HHS R01 GM079523
6 · The paper itself

Abstract

In many eukaryotic mRNAs one or more short 'upstream' open reading frames, uORFs, precede the initiator of the main coding sequence. Upstream ORFs are functionally diverse as illustrated by their variety of features in polyamine pathway biosynthetic mRNAs. Their propensity to act as sensors for regulatory circuits and to amplify the signals likely explains their occurrence in most polyamine pathway mRNAs. The uORF-mediated polyamine responsive autoregulatory circuits found in polyamine pathway mRNAs exemplify the translationally regulated dynamic interface between components of the proteome and metabolism.

Indexed as

Gene Expression RegulationOpen Reading FramesProtein BiosynthesisAcetyltransferasesAdenosylmethionine DecarboxylaseAnimalsCarrier ProteinsDiamine N-AcetyltransferaseFrameshifting, RibosomalPolyaminesProteinsSpermine SynthaseAcetyltransferasesAdenosylmethionine DecarboxylaseCarrier ProteinsDiamine N-Acetyltransferaseornithine decarboxylase antizymeornithine decarboxylase antizyme inhibitorPolyaminesProteinsSpermine Synthase

Identifiers

PMID19920120
PMCPMC2811004
OpenAlexW2071008994

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.