Evidence map›Paper›PMID 19915935›Full record

ArticleIn vitro cellular & developmental biology. Animal2010

Human colon tissue in organ culture: preservation of normal and neoplastic characteristics.

Michael K Dame, Narasimharao Bhagavathula, Cohra Mankey, Marissa DaSilva, Tejaswi Paruchuri, Muhammad Nadeem Aslam, James Varani

Abstract read
In one paragraph

Article in In vitro cellular & developmental biology. Animal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Intestinal Explant Cultures from Gilthead Seabream (International journal of molecular sciences · 2020
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Human colonic crypts in culture: segregation of immunochemical markers in normal versus adenoma-derived.Laboratory investigation; a journal of technical methods and pathology · 2014
    Article
  12. Article
  13. Article
  14. Altered molecular pattern of mucosal healing in Crohn's disease fibrotic stenosis.World journal of gastrointestinal pathophysiology · 2013
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Michael K DameDepartment of Pathology, University of Michigan Medical School, Ann Arbor, MI 48109, USA. mdame@med.umich.edu
Narasimharao Bhagavathula
Cohra Mankey
Marissa DaSilva
Tejaswi Paruchuri
Muhammad Nadeem Aslam
James Varani
University of Michigan–Ann Arbor · US

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
Dietary Marine Algae Extract and Colon Cancer ChemopreventionR21CA140760 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI VARANI, JAMES · 2009 to 2010
$374k
NCI NIH HHS 5 P30 CA46592NCI NIH HHS CA140760NCI NIH HHS P30 CA046592NCI NIH HHS R21 CA140760
6 · The paper itself

Abstract

Normal and neoplastic human colon tissue obtained at surgery was used to establish conditions for organ culture. Optimal conditions included an atmosphere of 5% CO2 and 95% O2; tissue partially submerged with mucosa at the gas interface; and serum-free medium with 1.5 mM Ca2+ and a number of growth supplements. Histological, histochemical, and immunohistochemical features that distinguish normal and neoplastic tissue were preserved over a 2-d period. With normal tissue, this included the presence of elongated crypts with small, densely packed cells at the crypt base and mucin-containing goblet cells in the upper portion. Ki67 staining, for proliferating cells, was confined to the lower third of the crypt, while expression of extracellular calcium-sensing receptor was seen in the upper third and surface epithelium. E-cadherin and β-catenin were expressed throughout the epithelium and confined to the cell surface. In tumor tissue, the same disorganized, abnormal glandular structures seen at time zero were present after 2 d. The majority of cells in these structures were mucin-poor, but occasional goblet cells were seen and mucin staining was present. Ki67 staining was seen throughout the abnormal epithelium and calcium-sensing receptor expression was weak and variable. E-cadherin was seen at the cell surface (similar to normal tissue), but in some places, there was diffuse cytoplasmic staining. Finally, intense cytoplasmic and nuclear β-catenin staining was observed in cultured neoplastic tissue.

Indexed as

Organ Culture Techniquesbeta CateninBiomarkersCadherinsCarbon DioxideCell DifferentiationColonColonic NeoplasmsEosine Yellowish-(YS)HematoxylinHumansMatrix Metalloproteinase 1OxygenReceptors, Calcium-Sensingbeta CateninBiomarkersCadherinsCarbon DioxideCASR protein, humanEosine Yellowish-(YS)HematoxylinMatrix Metalloproteinase 1OxygenReceptors, Calcium-Sensing

Identifiers

PMID19915935
PMCPMC2889208
OpenAlexW2049241969

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.