Evidence map›Paper›PMID 19915161›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2010

Characterization of the PcCdc42 small G protein from Pneumocystis carinii, which interacts with the PcSte20 life cycle regulatory kinase.

Bryan J Krajicek, Theodore J Kottom, Leah Villegas, Andrew H Limper

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In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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  6. The Interaction ofJournal of immunology (Baltimore, Md. : 1950) · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Bryan J KrajicekThoracic Diseases Research Unit, Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, Mayo Clinic College of Medicine, Rochester, Minnesota, USA.
Theodore J Kottom
Leah Villegas
Andrew H Limper
Mayo Clinic · US

Funding

Pneumocystis: Macrophage & Epithelial ActivationR01HL062150 · NHLBI · MAYO CLINIC ROCHESTER · PI ANDREW H LIMPER · 1998 to 2026
$9.2M
Control of the Pneumocystis carinii Life CycleR01HL055934 · NHLBI · MAYO CLINIC ROCHESTER · PI LIMPER, ANDREW H · 1995 to 2008
$3.0M
NHLBI RESPIRATORY BIOLOGY RESEARCH TRAINING GRANTT32HL007897 · NHLBI · MAYO CLINIC ROCHESTER · PI LIMPER, ANDREW H · 1998 to 2007
$1.7M
NHLBI NIH HHS R01 HL055934NHLBI NIH HHS R01 HL062150NHLBI NIH HHS R01-HL-55934NHLBI NIH HHS R01-HL-62150NHLBI NIH HHS T32-HL-07897
6 · The paper itself

Abstract

Pneumocystis carinii (Pc) causes severe pneumonia in immunocompromised hosts. The binding of Pc trophic forms to alveolar epithelial cells is a central feature of infection, inducing the expression and activation of PcSte20, a gene participating in mating, proliferation, and pseudohyphal growth. In related fungi, Ste20 proteins are generally activated by immediate upstream small G proteins of the Cdc42-like family. PcCdc42 has not been previously described in Pneumocystis. To address the potential role of such a G protein in Pneumocystis, PcCdc42 was cloned from a Pc cDNA library. Using the full-length 576-bp PcCdc42 cDNA sequence, a CHEF blot of genomic DNA yielded a single band, providing evidence that this gene is present as a single copy within the genome. The total length of PcCdc42 cDNA was 576 bp with an estimated molecular mass of approximately 38 kDa. BLASTP analysis demonstrated greater than 80% homology with other fungal Cdc42p proteins. Northern analysis indicated equal mRNA expression in both cystic and trophic life forms. Heterologous expression of PcCdc42 in Saccharomyces cerevisiae (Sc) demonstrated that PcCdc42p was able to restore growth in an ScCdc42Delta yeast strain. Additional assays with purified PcCdc42 protein demonstrated GTP binding and intrinsic GTPase activity, which was partially but significantly suppressed by Clostridium difficile toxin B, characteristic of Cdc42 GTPases. Furthermore, PcCdc42 protein was also shown to bind to the downstream PCSte20 kinase partner in the presence (but not the absence) of GTP. These data indicate that Pc possesses a Cdc42 gene expressing an active G protein, which binds the downstream regulatory kinase PcSte20, important in Pc life cycle regulation.

Indexed as

Amino Acid Sequencecdc42 GTP-Binding ProteinFungal ProteinsGuanosine TriphosphateHumansIntracellular Signaling Peptides and ProteinsMolecular Sequence DataMonomeric GTP-Binding ProteinsPneumocystis cariniiProtein Serine-Threonine Kinasescdc42 GTP-Binding ProteinFungal ProteinsGuanosine TriphosphateIntracellular Signaling Peptides and ProteinsMonomeric GTP-Binding ProteinsProtein Serine-Threonine Kinases

Identifiers

PMID19915161
PMCPMC2822561
OpenAlexW2106670470

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.