ArticleNucleic acids research2010
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata.
Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 267 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
267 citing papers in PubMed.
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- CALANGO: A phylogeny-aware comparative genomics tool for discovering quantitative genotype-phenotype associations across species.Patterns (New York, N.Y.) · 2023Article
- Genome-Scale Modeling and Systems Metabolic Engineering of Vibrio natriegens for the Production of 1,3-Propanediol.Methods in molecular biology (Clifton, N.J.) · 2023Article
- Distinctive roles between rumen epimural and content bacterial communities on beef cattle feed efficiency: A combined analysis.Current research in microbial sciences · 2021Article
- PacBio-Based Protocol for Bacterial Genome Assembly.Methods in molecular biology (Clifton, N.J.) · 2021Article
- A complete and flexible workflow for metaproteomics data analysis based on MetaProteomeAnalyzer and Prophane.Nature protocols · 2020Article
- Expanding Tiny Earth to genomics: a bioinformatics approach for an undergraduate class to characterize antagonistic strains.FEMS microbiology letters · 2020Article
- Loci Encoding Compounds Potentially Active against Drug-Resistant Pathogens amidst a Decreasing Pool of Novel Antibiotics.Applied and environmental microbiology · 2019Article
- High precision protein functional site detection using 3D convolutional neural networks.Bioinformatics (Oxford, England) · 2019Article
- Article
- Systematic discovery of uncharacterized transcription factors in Escherichia coli K-12 MG1655.Nucleic acids research · 2018Article
- The Nothoaspis amazoniensis Complete Mitogenome: A Comparative and Phylogenetic Analysis.Veterinary sciences · 2018Article
- Complete genome sequence of the halophile bacteriumStandards in genomic sciences · 2018Article
- MetaHCR: a web-enabled metagenome data management system for hydrocarbon resources.Database : the journal of biological databases and curation · 2018Article
- The complete genomic sequence of a novel cold-adapted bacterium,Standards in genomic sciences · 2018Article
- Actinoalloteichus fjordicus sp. nov. isolated from marine sponges: phenotypic, chemotaxonomic and genomic characterisation.Antonie van Leeuwenhoek · 2017Article
- [Pathogen analysis in patients with diabetic foot osteomyelitis using 16S rRNA high-throughput sequencing].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2017Article
- ProLanGO: Protein Function Prediction Using Neural Machine Translation Based on a Recurrent Neural Network.Molecules (Basel, Switzerland) · 2017Article
- Genomes OnLine Database (GOLD) v.6: data updates and feature enhancements.Nucleic acids research · 2017Article
207 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Genomes On Line Database (GOLD) is a comprehensive resource for centralized monitoring of genome and metagenome projects worldwide. Both complete and ongoing projects, along with their associated metadata, can be accessed in GOLD through precomputed tables and a search page. As of September 2009, GOLD contains information for more than 5800 sequencing projects, of which 1100 have been completed and their sequence data deposited in a public repository. GOLD continues to expand, moving toward the goal of providing the most comprehensive repository of metadata information related to the projects and their organisms/environments in accordance with the Minimum Information about a (Meta)Genome Sequence (MIGS/MIMS) specification. GOLD is available at: http://www.genomesonline.org and has a mirror site at the Institute of Molecular Biology and Biotechnology, Crete, Greece, at: http://gold.imbb.forth.gr/
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What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.