Evidence map›Paper›PMID 19913868›Full record

ArticleVirology2010

Cell context-dependent involvement of ATR in early stages of retroviral replication.

Yi-Xin Yang, Vincent Guen, Jonathan Richard, Eric A Cohen, Lionel Berthoux

Abstract read
In one paragraph

Article in Virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Mu transpososome and RecBCD nuclease collaborate in the repair of simple Mu insertions.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  7. Article
  8. Article
  9. Review
  10. Identification of SNF2h, a chromatin-remodeling factor, as a novel binding protein of Vpr of human immunodeficiency virus type 1.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yi-Xin YangLaboratory of retrovirology, University of Québec, 3351 boulevard des Forges, CP500, Trois-Rivières, QC, Canada. yixin_yang@hotmail.com
Vincent Guen
Jonathan Richard
Eric A Cohen
Lionel Berthoux
Université du Québec à Trois-Rivières · CAMontreal Clinical Research Institute · CA

Funding

CIHR 12381-4
6 · The paper itself

Abstract

Retroviral DNA integration leaves behind a single-strand DNA discontinuity at each virus:host DNA junction. It has long been proposed that cellular proteins detect and repair the integrated DNA and that failure to do so might lead to apoptotic cell death, but their identity remains unknown. PIKK family members ATM, DNA-PKcs and ATR have all been proposed to be important for HIV-1 replication, but these findings turned out to be very controversial. In order to clarify their role in retroviral replication, we analyzed the effect of pharmacological inhibitors and of a dominant-negative version of ATR on the replication of retroviruses in cell lines relevant to HIV-1 infection. Our data show that ATR and probably other PIKKs as well are involved in retroviral replication in some but not all cell lines and that ATR increases the frequency of retroviral transduction by a mechanism other than the enhancement of infected cell survival.

Indexed as

AndrostadienesAnimalsAtaxia Telangiectasia Mutated ProteinsCaffeineCell Cycle ProteinsCell LineCell Transformation, ViralHIV-1HIV-2HIV InfectionsLeukemia, ExperimentalLeukemia Virus, MurineProtein Kinase InhibitorsProtein Serine-Threonine KinasesRetroviridaeRetroviridae InfectionsAndrostadienesAtaxia Telangiectasia Mutated ProteinsATR protein, humanCaffeineCell Cycle ProteinsProtein Kinase InhibitorsProtein Serine-Threonine KinasesWortmannin

Identifiers

PMID19913868
PMCPMC3955184
OpenAlexW2076985219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.