Evidence map›Paper›PMID 19913599›Full record

ArticleBiochimica et biophysica acta2010

Metal transcription factor-1 regulation via MREs in the transcribed regions of selenoprotein H and other metal-responsive genes.

Zoia R Stoytcheva, Vladimir Vladimirov, Vanessa Douet, Ilko Stoychev, Marla J Berry

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Zoia R StoytchevaDepartment of Cell and Molecular Biology, John A. Burns School of Medicine, University of Hawaii at Manoa, 651 Ilalo Street, Suite 222, Honolulu, HI 96813, USA.
Vladimir Vladimirov
Vanessa Douet
Ilko Stoychev
Marla J Berry
University of Hawaiʻi at Mānoa · USVirginia Commonwealth University · US

Funding

RESEARCH DESIGN, BIOSTATISTICS AND RESEARCH ETHICS COREG12MD007601 · NIMHD · UNIVERSITY OF HAWAII AT MANOA · PI BERRY, MARLA J · 2012 to 2016
$13.0M
MECHANISM OF SELENOPROTEIN SYNTHESIS IN EUKARYOTESR01DK047320 · NIDDK · UNIVERSITY OF HAWAII AT MANOA · PI BERRY, MARLA J · 1994 to 2020
$5.8M
SELENOPROTEIN P FUNCTION AND REGULATION OF EXPRESSIONR01NS040302 · NINDS · UNIVERSITY OF HAWAII AT MANOA · PI BERRY, MARLA J · 2000 to 2007
$2.8M
ALTERNATIVE MECHANISMS OF UGA CODON RECOGNITIONR01DK052963 · NIDDK · UNIVERSITY OF HAWAII AT MANOA · PI BERRY, MARLA J · 1997 to 2005
$1.4M
MECHANISM OF SELENOPROTEIN SYNTHESISR56DK047320 · NIDDK · UNIVERSITY OF HAWAII AT MANOA · PI BERRY, MARLA J · 2009 to 2009
$368k
NIDDK NIH HHS DK47320NIDDK NIH HHS DK52963NIDDK NIH HHS R01 DK047320NIDDK NIH HHS R01 DK052963NIDDK NIH HHS R56 DK047320NIMHD NIH HHS G12 MD007601NINDS NIH HHS NS40302NINDS NIH HHS R01 NS040302
6 · The paper itself

Abstract

Selenoprotein H is a redox-sensing DNA binding protein that upregulates genes involved in antioxidant responses. Given the known links between oxidative stress and heavy metals, we investigated the potential for regulation of selenoprotein H by metals. In silico analysis of the selenoprotein H genes from nine species reveals multiple predicted metal response elements (MREs). To validate MRE function, we investigated the effects of zinc or cadmium addition and metal-responsive transcription factor 1 (MTF-1) knockout on selenoprotein H mRNA levels. Chromatin immunoprecipitation was used to directly assess physical binding of the transcription factor to MREs in the human and mouse selenoprotein H genes. The results reported herein show that selenoprotein H is a newly identified target for MTF-1. Further, whereas nearly all prior studies of MREs focused on those located in promoters, we demonstrate binding of MTF-1 to MREs located downstream of the transcription start sites in the human and murine selenoprotein H genes. Finally, we identified MREs in downstream sequences in 15 additional MTF-1 regulated genes lacking promoter MREs, and demonstrated MTF-1 binding in three of these genes. This regulation via sequences downstream of promoters highlights a new direction for identifying previously unrecognized target genes for MTF-1.

Indexed as

Up-RegulationAmnionAnimalsCell LineCell Line, TumorDNA-Binding ProteinsDNA PrimersGenes, ReporterHumansKidneyLuciferasesMacacaMetals, HeavyMiceOxidative StressReverse Transcriptase Polymerase Chain ReactionDNA-Binding ProteinsDNA PrimersLuciferasesMetals, Heavyselenoprotein H, humanselenoprotein H, mouseSelenoproteinsTranscription Factor MTF-1Transcription Factors

Identifiers

PMID19913599
PMCPMC2826586
OpenAlexW2094386811

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.