Evidence map›Paper›PMID 19913005›Full record

ArticleDevelopmental biology2010

Pax2 and Pea3 synergize to activate a novel regulatory enhancer for spalt4 in the developing ear.

Meyer Barembaum, Marianne Bronner-Fraser

Abstract read
In one paragraph

Article in Developmental biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Comparative assessment of Fgf's diverse roles in inner ear development: A zebrafish perspective.Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Review
  2. Article
  3. Article
  4. A medium-scale assay for enhancer validation in amniotes.Developmental dynamics : an official publication of the American Association of Anatomists · 2015
    Article
  5. SALL4: engine of cell stemness.Current gene therapy · 2014
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Meyer BarembaumDivision of Biology 139-74, California Institute of Technology, Pasadena, CA 91125, USA.
Marianne Bronner-Fraser
California Institute of Technology · US

Funding

Transcriptional Casualty in Embryonic Morphogenesis: from the Specifications GRNP01HD037105 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI MCCLAY, DAVID R · 1999 to 2018
$27.1M
Ectodermal Placode Development into Sensory StructuresR01DE016459 · NIDCR · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI BRONNER, MARIANNE · 2004 to 2014
$3.8M
NICHD NIH HHS HD037105NIDCR NIH HHS DE16459NIDCR NIH HHS R01 DE016459
6 · The paper itself

Abstract

The transcription factor spalt4 is a key early-response gene in otic placode induction. Here, we characterize the cis-regulatory regions of spalt4 responsible for activation of its expression in the developing otic placode and report the isolation of a novel core enhancer. Identification and mutational analysis of putative transcription factor binding sites reveal that Pea3, a downstream effector of FGF signaling, and Pax2 directly activate spalt4 during ear development. Morpholino-mediated knock-down of each factor reduces or eliminates reporter expression. In contrast, combined over-expression of Pea3 and Pax2 drives ectopic reporter expression, suggesting that they function synergistically. These studies expand the gene regulatory network underlying early otic development by identifying direct inputs that mediate spalt4 expression.

Indexed as

AnimalsChick EmbryoEarEmbryonic DevelopmentEmbryo, NonmammalianGene Expression Regulation, DevelopmentalHomeodomain ProteinsPAX2 Transcription FactorRegulatory Sequences, Nucleic AcidTranscription FactorsHomeodomain ProteinsPAX2 Transcription Factorspalt protein, vertebratetranscription factor PEA3Transcription Factors

Identifiers

PMID19913005
PMCPMC2892740
OpenAlexW2071475829

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.