Evidence map›Paper›PMID 19911767›Full record

ArticleThe Journal of organic chemistry2009

Mono-amine functionalized phthalocyanines: microwave-assisted solid-phase synthesis and bioconjugation strategies.

S Sibel Erdem, Irina V Nesterova, Steven A Soper, Robert P Hammer

Abstract read
In one paragraph

Article in The Journal of organic chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

S Sibel ErdemDepartment of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, USA.
Irina V Nesterova
Steven A Soper
Robert P Hammer

Funding

Modular Microfluidic System for Automated DNA SequencingR01HG001499 · NHGRI · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI SOPER, STEVEN ALLAN · 1996 to 2005
$3.0M
High Throughput Modular Microfluidic Systems for Drug Discovery/DevelopmentR01EB006639 · NIBIB · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI SOPER, STEVEN ALLAN · 2007 to 2010
$2.6M
NHGRI NIH HHS HG01499NHGRI NIH HHS R01 HG001499NIBIB NIH HHS EB006639NIBIB NIH HHS R01 EB006639
6 · The paper itself

Abstract

Phthalocyanines (Pcs) are excellent candidates for use as fluors for near-infrared (near-IR) fluorescent tagging of biomolecules for a wide variety of bioanalytical applications. Monofunctionalized Pcs, having two different types of peripheral substitutents, one for covalent conjugation of the Pc to biomolecules and others to improve the solubility of the macrocycle, are ideally suited for the desired applications. To date, difficulties faced during the purification of monofunctionalized Pcs limited their usage in various types of applications. Herein are reported a new synthetic method for rapid synthesis of the target Pcs and bioconjugation techniques for labeling of the oligonucleotides with the near-IR fluors. A novel synthetic route was developed utilizing a hydrophilic, poly(ethylene glycol) (PEG)-based support with an acid-labile Rink Amide linker. The Pcs were functionalized with an amine group for covalent conjugation purposes and were decorated with short PEG chains, serving as solubilizing groups. Microwave-assisted solid-phase synthetic method was successfully applied to obtain pure asymmetrically substituted monoamine functionalized Pcs in a short period of time. Three different bioconjugation techniques, reductive amination, amidation, and Huisgen cycloaddition, were employed for covalent conjugation of Pcs to oligonucleotides. The described microwave-assisted bioconjugation methods give an opportunity to synthesize and isolate the Pc-oligonucleotide conjugate in a few hours.

Indexed as

MicrowavesAmidesAminesChromatography, High Pressure LiquidIndolesIsoindolesOligonucleotidesPolyethylene GlycolsSolubilityTime FactorsWaterAmidesAminesIndolesIsoindolesOligonucleotidesphthalocyaninePolyethylene GlycolsWater

Identifiers

PMID19911767
PMCPMC2796328

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.