Evidence map›Paper›PMID 19910462›Full record

ArticleThe Journal of biological chemistry2010

Histone variant H2A.Z regulates centromere silencing and chromosome segregation in fission yeast.

Haitong Hou, Yu Wang, Scott P Kallgren, James Thompson, John R Yates, Songtao Jia

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 54 citations in OpenAlex.

  1. Pooled it
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  17. Point centromere activity requires an optimal level of centromeric noncoding RNA.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  18. PWWP2A: A novel mitosis link?Cell cycle (Georgetown, Tex.) · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Haitong HouDepartment of Biological Sciences, Columbia University, New York, New York 10027, USA.
Yu Wang
Scott P Kallgren
James Thompson
John R Yates
Songtao Jia
Columbia University · USScripps Research Institute · US

Funding

ZDS2P REGULATES SWE1P-DEPENDENT POLARIZED CELL GROWTH IN S CEREVISIAEP41RR011823 · NCRR · UNIVERSITY OF WASHINGTON · PI DAVIS, TRACY · 1996 to 2011
$24.7M
Mechanism of heterochromatin assemblyR01GM085145 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI JIA, SONGTAO · 2008 to 2017
$3.0M
NCRR NIH HHS P41 RR011823NCRR NIH HHS P41 RR11823NIGMS NIH HHS R01 GM085145
6 · The paper itself

Abstract

The incorporation of histone variant H2A.Z into nucleosomes plays essential roles in regulating chromatin structure and gene expression. A multisubunit complex containing chromatin remodeling protein Swr1 is responsible for the deposition of H2A.Z in budding yeast and mammals. Here, we show that the JmjC domain protein Msc1 is a novel component of the fission yeast Swr1 complex and is required for Swr1-mediated incorporation of H2A.Z into nucleosomes at gene promoters. Loss of Msc1, Swr1, or H2A.Z results in loss of silencing at centromeres and defective chromosome segregation, although centromeric levels of CENP-A, a centromere-specific histone H3 variant that is required for setting up the chromatin structure at centromeres, remain unchanged. Intriguingly, H2A.Z is required for the expression of another centromere protein, CENP-C, and overexpression of CENP-C rescues centromere silencing defects associated with H2A.Z loss. These results demonstrate the importance of H2A.Z and CENP-C in maintaining a silenced chromatin state at centromeres.

Indexed as

Chromosome SegregationGene SilencingAdenosine TriphosphatasesAmino Acid SequenceAnimalsCentromereChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsHistonesHomeodomain ProteinsHumansMolecular Sequence DataMutationPromoter Regions, GeneticSaccharomyces cerevisiae ProteinsAdenosine Triphosphatasescentromere protein CChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsHistonesHomeodomain ProteinsMsc1 protein, S pombeSaccharomyces cerevisiae ProteinsSchizosaccharomyces pombe ProteinsSwr1 protein, S cerevisiae

Identifiers

PMID19910462
PMCPMC2804349
OpenAlexW2101866815

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.