Evidence map›Paper›PMID 19909083›Full record

ArticleThe Journal of infectious diseases2009

Conserved HIV-1 epitopes continuously elicit subdominant cytotoxic T-lymphocyte responses.

Yi Liu, John McNevin, Morgane Rolland, Hong Zhao, Wenjie Deng, Janine Maenza, Claire E Stevens, Ann C Collier, M Juliana McElrath, James I Mullins

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  8. Acute-Phase CD4Journal of virology · 2018
    Article
  9. Article
  10. HIV-1 prophylactic vaccines: state of the art.Journal of virus eradication · 2016
    Review
  11. New prospects for a preventive HIV-1 vaccine.Journal of virus eradication · 2015
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Yi LiuDepartment of Microbiology, University of Washington School of Medicine, Seattle, Washington 98195-8070, USA. yiliu197@u.washington.edu
John McNevin
Morgane Rolland
Hong Zhao
Wenjie Deng
Janine Maenza
Claire E Stevens
Ann C Collier
M Juliana McElrath
James I Mullins
University of Washington · USCzech Academy of Sciences, Institute of Microbiology · CZCancer Research Center · USInfectious Disease Research Institute · US

Funding

University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Grace C. John-Stewart · 1988 to 2026
$104.9M
ZIPRASIDONE IN NORMAL HEPATIC FUNCTION SUBJECTS &IN HEPATIC DYSFUCTIN SUBJECTSM01RR000037 · NCRR · UNIVERSITY OF WASHINGTON · PI GIBSON, RONALD L · 1985 to 2007
$33.8M
Viral Determinants of HIV-1 Transmission in African HeterosexualsP01AI057005 · NIAID · UNIVERSITY OF WASHINGTON · PI COREY, LAWRENCE · 2003 to 2014
$20.5M
NCRR NIH HHS M01 RR000037NCRR NIH HHS M01-RR-00037NIAID NIH HHS P01 AI057005NIAID NIH HHS P01 AI57005NIAID NIH HHS P30 AI027757NIAID NIH HHS P30 AI27757
6 · The paper itself

Abstract

backgroundThe epitope specificities and antiviral activities of class I HLA-restricted CD8(+) T cells, especially those induced during human immunodeficiency virus type 1 (HIV-1) primary infection, are important considerations in designing HIV-1 vaccines. Conserved epitopes may be more commonly and persistently recognized than variable epitopes, as they may be more likely to be present in infecting viruses. However, some studies have shown preferential or similar targeting of variable versus conserved epitopes during primary infection.

methodsWe analyzed cytotoxic T-lymphocyte (CTL) responses toward predefined conserved and variable epitopes in 45 subjects during primary (n = 34) and/or chronic infection (n = 16).

resultsConserved and variable CTL epitopes were recognized with similar probabilities, whereas conserved epitopes generally elicited subdominant responses during both primary and chronic infection. During primary infection, CTL responses against Gag versus responses against Env and variable epitopes tended to be associated with lower and higher viral loads, respectively. During chronic infection, Env-specific responses tended to be associated with lower CD4(+) cell counts.

conclusionsSubdominant CTL recognition of conserved HIV-1 epitopes commonly occurs from the primary through chronic stages of HIV-1 infection. These findings underscore the challenge in designing T cell-based vaccines that can induce immunodominant CTL responses to conserved HIV-1 regions.

Indexed as

CD8-Positive T-LymphocytesEpitopes, T-LymphocyteHIV-1HIV InfectionsHumansMaleT-Lymphocytes, CytotoxicEpitopes, T-Lymphocyte

Identifiers

PMID19909083
PMCPMC2783836
OpenAlexW1977361829

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.