Evidence map›Paper›PMID 19907653›Full record

ArticlePloS one2009

Selection for genetic variation inducing pro-inflammatory responses under adverse environmental conditions in a Ghanaian population.

Maris Kuningas, Linda May, Riin Tamm, David van Bodegom, Anita H J van den Biggelaar, Johannes J Meij, Marijke Frölich, Juventus B Ziem, Helena E D Suchiman, Andres Metspalu and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Pathogen-Host Defense in the Evolution of Depression: Insights into Epidemiology, Genetics, Bioregional Differences and Female Preponderance.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2017
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
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  12. Article
  13. Better immunity in later life: a position paper.Age (Dordrecht, Netherlands) · 2014
    Review
  14. The frequency of an IL-18-associated haplotype in Africans.European journal of human genetics : EJHG · 2013
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Maris KuningasDepartment of Gerontology and Geriatrics, Leiden University Medical Center, Leiden, The Netherlands.
Linda May
Riin Tamm
David van Bodegom
Anita H J van den Biggelaar
Johannes J Meij
Marijke Frölich
Juventus B Ziem
Helena E D Suchiman
Andres Metspalu
P Eline Slagboom
Rudi G J Westendorp
Leiden University Medical Center · NLUniversity of Tartu · EELeyden Academy on Vitality and Ageing · NLNetherlands Consortium for Healthy Ageing · NLThe Kids Research Institute Australia · AUUniversity for Development Studies · GH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChronic inflammation is involved in the pathogenesis of chronic age-associated, degenerative diseases. Pro-inflammatory host responses that are deleterious later in life may originate from evolutionary selection for genetic variation mediating resistance to infectious diseases under adverse environmental conditions. METHODOLOGY/PRINCIPAL

findingsIn the Upper-East region of Ghana where infection has remained the leading cause of death, we studied the effect on survival of genetic variations at the IL10 gene locus that have been associated with chronic diseases. Here we show that an IL10 haplotype that associated with a pro-inflammatory innate immune response, characterised by low IL-10 (p = 0.028) and high TNF-alpha levels (p = 1.39 x 10(-3)), was enriched among Ghanaian elders (p = 2.46 x 10(-6)). Furthermore, in an environment where the source of drinking water (wells/rivers vs. boreholes) influences mortality risks (HR 1.28, 95% CI [1.09-1.50]), we observed that carriers of the pro-inflammatory haplotype have a survival advantage when drinking from wells/rivers but a disadvantage when drinking from boreholes (p(interaction) = 0.013). Resequencing the IL10 gene region did not uncover any additional common variants in the pro-inflammatory haplotype to those SNPs that were initially genotyped. CONCLUSIONS/SIGNIFICANCE: Altogether, these data lend strong arguments for the selection of pro-inflammatory host responses to overcome fatal infection and promote survival in adverse environments.

Indexed as

AgingAllelesEnvironmentGenetic VariationGenotypeGhanaHaplotypesHumansImmunity, InnateInflammationInterleukin-10Molecular Sequence DataPolymorphism, Single NucleotideSequence Analysis, DNATumor Necrosis Factor-alphaInterleukin-10Tumor Necrosis Factor-alpha

Identifiers

PMID19907653
PMCPMC2771352
OpenAlexW2157489088

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.