Evidence map›Paper›PMID 19906908›Full record

ArticleJournal of virology2010

Molecular epidemiology of simian immunodeficiency virus infection in wild-living gorillas.

Cécile Neel, Lucie Etienne, Yingying Li, Jun Takehisa, Rebecca S Rudicell, Innocent Ndong Bass, Joseph Moudindo, Aimé Mebenga, Amandine Esteban, Fran Van Heuverswyn and 16 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 93 citations in OpenAlex.

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  19. Origin of the HIV-1 group O epidemic in western lowland gorillas.Proceedings of the National Academy of Sciences of the United States of America · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 13 institutions in 7 countries.

Cécile NeelUMR 145, Institute of Research and Development and University of Montpellier 1, 911 Avenue Agropolis, BP 64501, 34394 Montpellier Cedex 5, France.
Lucie Etienne
Yingying Li
Jun Takehisa
Rebecca S Rudicell
Innocent Ndong Bass
Joseph Moudindo
Aimé Mebenga
Amandine Esteban
Fran Van Heuverswyn
Florian Liegeois
Philip J Kranzusch
Peter D Walsh
Crickette M Sanz
David B Morgan
Jean-Bosco N Ndjango
Jean-Christophe Plantier
Sabrina Locatelli
Mary K Gonder
Fabian H Leendertz
Christophe Boesch
Angelique Todd
Eric Delaporte
Eitel Mpoudi-Ngole
Beatrice H Hahn
Martine Peeters
Comité National de Lutte contre le SIDA · CMUniversity of Alabama at Birmingham · USInstitut de Recherche pour le Développement · FRUniversité de Montpellier · FRUniversity at Albany, State University of New York · USHarvard University · USMax Planck Institute for Evolutionary Anthropology · DERobert Koch Institute · DEUniversité de Kisangani · CDUniversité de Rouen Normandie · FRUniversity of Bangui · CFWashington University in St. Louis · USWildlife Conservation Society Congo · CG

Funding

Virology CoreP30AI027767 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI OLAF KUTSCH · 1988 to 2026
$84.1M
MOLECULAR BASIS OF VIRAL INFECTIVITYT32AI007245 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Aaron Gregory Schmidt · 1985 to 2026
$11.3M
Natural SIV Reservoirs and Human Zoonotic RiskR01AI050529 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2001 to 2022
$6.1M
Molecular Epidemiology and Natural History of SIVcpzR01AI058715 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2004 to 2013
$6.1M
Natural SIV Reservoirs and Human Zoonotic RiskR37AI050529 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI HAHN, BEATRICE H · 2008 to 2017
$5.7M
NIAID NIH HHS P30 AI027767NIAID NIH HHS P30 AI 27767NIAID NIH HHS R01 AI050529NIAID NIH HHS R01 AI058715NIAID NIH HHS R01 AI50529NIAID NIH HHS R01 AI58715NIAID NIH HHS R37 AI050529NIAID NIH HHS T32 AI007245NIAID NIH HHS T32 AI007245-25
6 · The paper itself

Abstract

Chimpanzees and gorillas are the only nonhuman primates known to harbor viruses closely related to HIV-1. Phylogenetic analyses showed that gorillas acquired the simian immunodeficiency virus SIVgor from chimpanzees, and viruses from the SIVcpz/SIVgor lineage have been transmitted to humans on at least four occasions, leading to HIV-1 groups M, N, O, and P. To determine the geographic distribution, prevalence, and species association of SIVgor, we conducted a comprehensive molecular epidemiological survey of wild gorillas in Central Africa. Gorilla fecal samples were collected in the range of western lowland gorillas (n = 2,367) and eastern Grauer gorillas (n = 183) and tested for SIVgor antibodies and nucleic acids. SIVgor antibody-positive samples were identified at 2 sites in Cameroon, with no evidence of infection at 19 other sites, including 3 in the range of the Eastern gorillas. In Cameroon, based on DNA and microsatellite analyses of a subset of samples, we estimated the prevalence of SIVgor to be 1.6% (range, 0% to 4.6%), which is significantly lower than the prevalence of SIVcpzPtt in chimpanzees (5.9%; range, 0% to 32%). All newly identified SIVgor strains formed a monophyletic lineage within the SIVcpz radiation, closely related to HIV-1 groups O and P, and clustered according to their field site of origin. At one site, there was evidence for intergroup transmission and a high intragroup prevalence. These isolated hot spots of SIVgor-infected gorilla communities could serve as a source for human infection. The overall low prevalence and sporadic distribution of SIVgor could suggest a decline of SIVgor in wild populations, but it cannot be excluded that SIVgor is still more prevalent in other parts of the geographical range of gorillas.

Indexed as

Animals, WildMolecular EpidemiologyAnimalsAntibodies, ViralBase SequenceDNA PrimersDNA, ViralFecesGorilla gorillaPhylogenySimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusAntibodies, ViralDNA PrimersDNA, Viral

Identifiers

PMID19906908
PMCPMC2812320
OpenAlexW2123891648

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.