Evidence map›Paper›PMID 19903212›Full record

ArticleInfluenza and other respiratory viruses2009

Genomic events underlying the changes in adamantane resistance among influenza A(H3N2) viruses during 2006-2008.

Varough Deyde, Rebecca Garten, Tiffany Sheu, Catherine Smith, Allison Myrick, John Barnes, Xiyan Xu, Michael Shaw, Alexander Klimov, Larisa Gubareva

Abstract read
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Article in Influenza and other respiratory viruses, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

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16citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
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  7. Structure and inhibition of the drug-resistant S31N mutant of the M2 ion channel of influenza A virus.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  8. Article
  9. Therapeutics against influenza.Current topics in microbiology and immunology · 2013
    Review
  10. Article
  11. Structural basis for proton conduction and inhibition by the influenza M2 protein.Protein science : a publication of the Protein Society · 2012
    Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Varough DeydeInfluenza Division, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA.
Rebecca Garten
Tiffany Sheu
Catherine Smith
Allison Myrick
John Barnes
Xiyan Xu
Michael Shaw
Alexander Klimov
Larisa Gubareva

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAdamantanes resistance in H3N2 viruses has been increasing since 2000, and in 2005-2006 reached nearly 100% in most countries, with the circulation of the N-lineage. In 2006-2007, however, a significant decrease in resistance was observed in many regions.

objectivesTo explore potential links between adamantane resistance and the A(H3N2) viruses that circulated between 2006 and 2008.

methodsA total of 1451 Influenza A (H3N2) viruses collected globally in 2001-2008 were screened for the presence of adamantane resistance markers. A subset of 100 viruses representing the broad genetic and geographic spectrum of these viruses was selected for complete genome sequencing and phylogenetic analyses.

resultsFull genome sequence analysis of 2006-2007 viruses revealed co-circulation of four distinct genotypes, designated A-D. Phylogenetic analyses demonstrated reassortment between viruses from the N-lineage and other viruses that had circulated in prior seasons, including those bearing an adamantane sensitive marker. Genotype D viruses became dominant in late 2006-2007 and continued to be the main H3N2 genotype in 2007-2008. Viruses of this genotype retained all N-lineage genome segments except PB2 and NP, which were acquired through reassortment.

conclusionsThe decrease in adamantane resistance at that time was due to transient co-circulation of genotypes that emerged through reassortment. Our findings emphasize the importance of complete genome sequencing in understanding the complex nature of the relationship between influenza virus evolution and antiviral resistance. The recent emergence of the pandemic multi-reassortant H1N1 virus underscores the importance of whole genome sequence monitoring for rapid detection of such unusual and novel strains.

Indexed as

Drug Resistance, ViralAdamantaneAntiviral AgentsCluster AnalysisGenome, ViralGenotypeHumansInfluenza A Virus, H3N2 SubtypeInfluenza, HumanPhylogenyRNA, ViralSequence Analysis, DNASequence HomologyAdamantaneAntiviral AgentsRNA, Viral

Identifiers

PMID19903212
PMCPMC4984730

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.