Evidence map›Paper›PMID 19897513›Full record

ArticleAmerican journal of epidemiology2009

Functional variants in the catalase and myeloperoxidase genes, ambient air pollution, and respiratory-related school absences: an example of epistasis in gene-environment interactions.

Madé Wenten, W James Gauderman, Kiros Berhane, Pi-Chu Lin, John Peters, Frank D Gilliland

Abstract read
In one paragraph

Article in American journal of epidemiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Myeloperoxidase G463A polymorphism and lung cancer risk in Asians: a pooled analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2013
    Pooled it
  2. Article
  3. The role of gene-ambient air pollution interactions in paediatric asthma.European respiratory review : an official journal of the European Respiratory Society · 2022
    Review
  4. Article
  5. Review
  6. Association ofFrontiers in endocrinology · 2019
    Article
  7. Oxidative Stress-Related Genetic Variants May Modify Associations of Phthalate Exposures with Asthma.International journal of environmental research and public health · 2017
    Article
  8. Review
  9. Environmental effects on immune responses in patients with atopy and asthma.The Journal of allergy and clinical immunology · 2014
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Madé WentenDepartment of Preventive Medicine, USC Keck School of Medicine, Los Angeles, CA 90033, USA.
W James Gauderman
Kiros Berhane
Pi-Chu Lin
John Peters
Frank D Gilliland

Funding

Translational Research Support CoreP30ES007048 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Joseph Leo Wiemels · 1996 to 2026
$46.4M
Urban Air Pollution and Children's Respiratory HealthP01ES011627 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI AVOL, EDWARD · 2002 to 2011
$30.2M
Urban Air Pollution &Persistent Early Life AsthmaP01ES009581 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GILLILAND, FRANK D. · 1999 to 2010
$6.8M
FACTORS IN CHILDHOOD LUNG SUSCEPTIBILITY TO POLLUTIONR01HL061768 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GILLILAND, FRANK D. · 1999 to 2008
$4.4M
Air Pollution, Inflammation and New Onset AsthmaR01HL076647 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI GILLILAND, FRANK D. · 2005 to 2009
$3.6M
NHLBI NIH HHS 5R01HL61768NHLBI NIH HHS 5R01HL76647NHLBI NIH HHS R01 HL061768NHLBI NIH HHS R01 HL076647NIEHS NIH HHS 5P01ES009581NIEHS NIH HHS 5P01ES011627NIEHS NIH HHS 5P30ES007048NIEHS NIH HHS P01 ES009581NIEHS NIH HHS P01 ES011627NIEHS NIH HHS P30 ES007048ORD VA RD831861-01PHS HHS R826708-01
6 · The paper itself

Abstract

The individual effect of functional single nucleotide polymorphisms within the catalase and myeloperoxidase genes (CAT and MPO) has been studied in relation to asthma; however, their interrelationship with ambient air pollution exposures has yet to be determined. The authors investigated the interrelationships between variants in CAT and MPO, ambient air pollutants, and acute respiratory illness. Health information, air pollution, and incident respiratory-related school absences were ascertained in January-June 1996 for 1,136 Hispanic and non-Hispanic white US elementary schoolchildren as part of the prospective Children's Health Study. Functional and tagging single nucleotide polymorphisms for the CAT and MPO loci were genotyped. The authors found epistasis between functional polymorphisms in the CAT/MPO loci, which differed by levels of oxidant-stress-producing air pollutants. Risk of respiratory-related school absences was elevated for children with the CAT (G/G) and MPO (G/A or A/A) genes (relative risk = 1.35, 95% confidence interval: 1.03, 1.77; P-interaction = 0.005). The epistatic effect of CAT and MPO variants was most evident in communities exhibiting high ambient ozone levels (P-interaction = 0.03). The association of respiratory-illness absences with functional variants in CAT and MPO that differ by air pollution levels illustrates the need to consider genetic epistasis in assessing gene-environment interactions.

Indexed as

AbsenteeismAcute DiseaseAir PollutantsCatalaseChildEpistasis, GeneticGenetic Predisposition to DiseaseHispanic or LatinoHumansNitrogen DioxideOzoneParticulate MatterPeroxidasePolymorphism, Single NucleotideProspective StudiesRespiratory Tract DiseasesAir PollutantsCatalaseNitrogen DioxideOzoneParticulate MatterPeroxidase

Identifiers

PMID19897513
PMCPMC2800273

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.