Evidence map›Paper›PMID 19896365›Full record

ReviewCurrent opinion in structural biology2009

Elongation by RNA polymerase: a race through roadblocks.

Dmitry G Vassylyev

Abstract readReview
In one paragraph

Review in Current opinion in structural biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Efficient, ultra-high-affinity chromatography in a one-step purification of complex proteins.Proceedings of the National Academy of Sciences of the United States of America · 2017
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  12. Promoter melting triggered by bacterial RNA polymerase occurs in three steps.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Dmitry G VassylyevDepartment of Biochemistry and Molecular Genetics, University of Alabama at Birmingham, Schools of Medicine and Dentistry, 402B KAUL Genetics Building, 720 20th Street South, Birmingham, AL 35294, United States. dmitry@uab.edu
University of Alabama at Birmingham · US

Funding

Transcription Regulation Through RNAP Secondary ChannelR01GM074840 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI VASSYLYEV, DMITRY G · 2005 to 2013
$4.1M
Molecular mechanisms of transcription elongationR01GM074252 · NIGMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI VASSYLYEV, DMITRY G · 2005 to 2009
$2.4M
NIGMS NIH HHS R01 GM074252NIGMS NIH HHS R01 GM074840NIGMS NIH HHS R01GM74252NIGMS NIH HHS R01GM74840
6 · The paper itself

Abstract

Transcription is the first and most regulated step of gene expression. RNA polymerase (RNAP) is the heart of the transcription machinery and a major target for numerous regulatory pathways in living cells. The crystal structures of transcription complexes formed by bacterial RNAP in various configurations have provided a number of breakthroughs in understanding basic, universal mechanisms of transcription and have revealed regulatory 'hot spots' in RNAP that serve as targets and anchors for auxiliary transcription factors. In combination with biochemical analyses, these structures allow feasible modeling of the regulatory complexes for which experimental structural data are still missing. The available structural information suggests a number of general mechanistic predictions that provide a reference point and direction for future studies of transcription regulation.

Indexed as

Transcription, GeneticBacteriaDNA-Directed RNA PolymerasesNucleotidesRNATranscription FactorsDNA-Directed RNA PolymerasesNucleotidesRNATranscription Factors

Identifiers

PMID19896365
PMCPMC2787642
OpenAlexW2141846890

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.