Evidence map›Paper›PMID 19893637›Full record

ArticleJournal of biomedicine & biotechnology2009

Methyl-CpG-binding PCR of bloodspots for confirmation of fragile X syndrome in males.

Ching-Cherng Tzeng, Chiou-Ping Liou, Chien-Feng Li, Ming-Chi Lai, Li-Ping Tsai, Wei-Chen Cho, Hui-Ting Chang

Open access · hybridAbstract read
In one paragraph

Article in Journal of biomedicine & biotechnology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ching-Cherng TzengDepartment of Pathology, Chi Mei Medical Center, Tainan, Taiwan. tzeng-tainan@yahoo.com.tw
Chiou-Ping Liou
Chien-Feng Li
Ming-Chi Lai
Li-Ping Tsai
Wei-Chen Cho
Hui-Ting Chang
Chi Mei Medical Center · TWBuddhist Tzu Chi General Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study demonstrates that methyl-CpG-binding PCR (MB-PCR) is a rapid and simple method for detecting fragile X syndrome (FXS) in males, which is performed by verifying the methylation status of the FMR1 promoter in bloodspots. Proteins containing methyl-CpG-binding (MB) domains can be freeze-stored and used as stocks, and the entire test requires only a few hours. The minimum amount of DNA required for the test is 0.5 ng. At this amount, detection sensitivity is not hampered, even mixing with excess unmethylated alleles up to 320 folds. We examined bloodspots from 100 males, including 24 with FXS, in a blinded manner. The results revealed that the ability of MB-PCR to detect FMR1 promoter methylation was the same as that of Southern blot hybridization. Since individuals with 2 or more X chromosomes generally have methylated FMR1 alleles, MB-PCR cannot be used to detect FXS in females.

Indexed as

Blood Specimen CollectionCpG IslandsDNA MethylationFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeHumansMalePolymerase Chain ReactionPromoter Regions, GeneticReproducibility of ResultsSensitivity and SpecificityFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1

Identifiers

PMID19893637
PMCPMC2773378
OpenAlexW2071320645

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.