Evidence map›Paper›PMID 19893027›Full record

ArticleThe American journal of pathology2009

Fluorescence in situ hybridization markers for prediction of cervical lymph node metastases.

Darawalee Wangsa, Kerstin Heselmeyer-Haddad, Patricia Ried, Elina Eriksson, Alejandro A Schäffer, Larry E Morrison, Juhua Luo, Gert Auer, Eva Munck-Wikland, Thomas Ried and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

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  4. Analysis of gene copy number changes in tumor phylogenetics.Algorithms for molecular biology : AMB · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 6 countries.

Darawalee WangsaDepartment of Oncology-Pathology, Karolinska Institute, Karolinska University Hospital, Stockholm, Sweden.
Kerstin Heselmeyer-Haddad
Patricia Ried
Elina Eriksson
Alejandro A Schäffer
Larry E Morrison
Juhua Luo
Gert Auer
Eva Munck-Wikland
Thomas Ried
Elisabeth Avall Lundqvist
Karolinska University Hospital · SENational Cancer Institute · MYAbbott (United States) · USBeijing Normal University · CNKarolinska Institutet · SENational Center for Biotechnology Information · USSophiahemmet Hospital · SE

Funding

Intratumor heterogeneity and tumor evolutionZIABC010834 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2023
$12.2M
Case Studies In GeneticsZIALM000097 · NLM · NATIONAL LIBRARY OF MEDICINE · PI SCHAFFER, ALEJANDRO A · 2009 to 2019
$4.6M
Cancer GenomicsZIABC010836 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI RIED, THOMAS · 2009 to 2011
$1.8M
Intramural NIH HHS
6 · The paper itself

Abstract

The presence of lymph node metastases is associated with poor prognosis in early stage cervical cancer. As of yet, no molecular markers predicting lymph node metastases have been identified. We examined single genetic markers and a composite marker, comprised of three fluorescence in situ hybridization (FISH) probes targeting the genes LAMP3, PROX1, and PRKAA1, in pretreatment cervical biopsies from 16 lymph node positive cases and 15 lymph node negative controls from women with stage IB and IIA cervical cancer. In addition, we determined clonal patterns by including CCND1 to compare the clonal constitution of primary tumors and associated lymph node metastases. The composite FISH marker allowed for classification of patients into those with and without lymph node metastases with a sensitivity and specificity of 75% and 87%, respectively (P = 0.001). The positive predictive value and negative predictive value were 86% and 76%, respectively. Clonal patterns varied among the tumors. In many cases, changes between the primary tumor and lymph node metastases in the most common clones may indicate that certain clones have a growth advantage for establishing metastases in lymph nodes. We conclude that the composite FISH marker may be useful for determining risk for subsequent development of lymph node metastases in patients with cervical cancer.

Indexed as

In Situ Hybridization, FluorescenceAdultAgedAMP-Activated Protein KinasesBiomarkers, TumorCyclin D1FemaleHomeodomain ProteinsHumansLymphatic MetastasisLysosomal-Associated Membrane Protein 3Lysosomal Membrane ProteinsMiddle AgedNeoplasm ProteinsNeoplasm StagingProspero-Related Homeobox 1 ProteinAMP-Activated Protein KinasesBiomarkers, TumorCCND1 protein, humanCyclin D1Homeodomain ProteinsLAMP3 protein, humanLysosomal-Associated Membrane Protein 3Lysosomal Membrane ProteinsNeoplasm ProteinsPRKAA1 protein, humanProspero-Related Homeobox 1 ProteinTumor Suppressor Proteins

Identifiers

PMID19893027
PMCPMC2789632
OpenAlexW2032388424

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.