Evidence map›Paper›PMID 19888301›Full record

ArticleEuropean journal of human genetics : EJHG2010

Copy number variation upstream of PMP22 in Charcot-Marie-Tooth disease.

Marian A J Weterman, Fred van Ruissen, Marit de Wissel, Lou Bordewijk, Johnny P A Samijn, W Ludo van der Pol, Farid Meggouh, Frank Baas

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In one paragraph

Article in European journal of human genetics : EJHG, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 89 citations in OpenAlex.

  1. Observational
  2. Review
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  7. Review
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  10. Article
  11. Article
  12. Non-coding genetic variants in human disease.Human molecular genetics · 2015
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. The PMP22 gene and its related diseases.Molecular neurobiology · 2013
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Marian A J WetermanNeurogenetics Lab, Department of Neurogenetics K2-213, Academic Medical Center Amsterdam, Meibergdreef 9, 1105 AZ Amsterdam, The Netherlands. m.a.weterman@amc.uva.nl
Fred van Ruissen
Marit de Wissel
Lou Bordewijk
Johnny P A Samijn
W Ludo van der Pol
Farid Meggouh
Frank Baas
Academic Medical Center · NLMaasstad Ziekenhuis · NLUniversity Medical Center Utrecht · NLUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In several individuals with a Charcot-Marie-Tooth (CMT) phenotype, we found a copy number variation (CNV) on chromosome 17p12 in the direct vicinity of the peripheral myelin protein 22 (PMP22) gene. The exact borders and size of this CNV were determined by Southern blot analysis, MLPA, vectorette PCR, and microarray hybridization analyses. All patients from six apparently unrelated families carried an identical 186-kb duplication different from the commonly reported 1.5-Mb duplication associated with CMT1A. This ancestral mutation that was not reported in the human structural variation database was only detected in affected individuals and family members. It was absent in 2124 control chromosomes and 40 patients with a chronic inflammatory demyelinating polyneuropathy (CIDP) and therefore should be regarded as causative for the disease. This variant escapes most routine diagnostic screens for CMT1A, because copy numbers of PMP22 probes were all normal. No indications were found for the involvement of the genes that are located within this duplication. A possible association of this duplication with a mutation in the PMP22 coding regions was also excluded. We suggest that this CNV proximal of the PMP22 gene leads to CMT through an unknown mechanism affecting PMP22 expression.

Indexed as

AdultBlotting, SouthernCharcot-Marie-Tooth DiseaseChromosome SegregationComparative Genomic HybridizationFemaleGene DosageGene DuplicationGenetic VariationHaplotypesHumansMaleMicrotubule ProteinsMiddle AgedMutationMyelin ProteinsMicrotubule ProteinsMyelin ProteinsPMP22 protein, humantektins

Identifiers

PMID19888301
PMCPMC2987248
OpenAlexW2108754964

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.