ArticleMolecular biology reports2010
Prediction and validation of conservative microRNAs of Solanum tuberosum L.
Article in Molecular biology reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed, 40 citations in OpenAlex.
- Article
- Genome-wide identification and characterization of microRNAs by small RNA sequencing for low nitrogen stress in potato.PloS one · 2020Article
- Identification and characterization of microRNAs and their targets in high-altitude stress-adaptive plant maca (Lepidium meyenii Walp).3 Biotech · 2017Article
- MicroRNA156: a potential graft-transmissible microRNA that modulates plant architecture and tuberization in Solanum tuberosum ssp. andigena.Plant physiology · 2014Article
- Identification and characterization of miRNAome in root, stem, leaf and tuber developmental stages of potato (Solanum tuberosum L.) by high-throughput sequencing.BMC plant biology · 2014Article
- Article
- Identification of novel and conserved microRNAs related to drought stress in potato by deep sequencing.PloS one · 2014Article
- Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing.PloS one · 2013Article
- Characterization of novel small RNAs from tea (Camellia sinensis L.).Molecular biology reports · 2012Article
- Article
- Tobacco microRNAs prediction and their expression infected with Cucumber mosaic virus and Potato virus X.Molecular biology reports · 2011Article
- osa-MIR393: a salinity- and alkaline stress-related microRNA gene.Molecular biology reports · 2011Article
Corrections and comments
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Potato (Solanum tuberosum) is an important crop around the world, and accounts for a significant amount of the food consumed by humans. However, little information is available about potato miRNAs which play important regulatory roles in plant growth and development. In the present study, computational prediction of potential miRNAs from potato revealed 71 miRNAs belonging to 48 families. Amongst these 71 mRNAs, 65 were predicted for the first time. Most potato miRNA families have one to three members, and sequence analysis showed that the candidate pre-miRNA sequences varied from 48 to 224 bp in length. To verify the predicted miRNAs, specific stem-loop RT primers were designed and real-time PCR assays were used to profile the expression levels of seven miRNAs from different tissues of potato. The results showed that all the selected miRNAs were successfully amplified. Most of them had their highest expression levels in leaves, and the lowest levels in the stem, while miR159 and miR164 presented a different expression pattern. The specific expression levels of each miRNAs in the tested tissues may be related to their particular functions in regulating potato vegetative growth and organ development.
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