Evidence map›Paper›PMID 19881955›Full record

ArticleNeoplasia (New York, N.Y.)2009

Proteomic identification of putative biomarkers of radiotherapy resistance: a possible role for the 26S proteasome?

Laura Smith, Omar Qutob, Mark B Watson, Andrew W Beavis, Donna Potts, Kevin J Welham, Veerabhadram Garimella, Michael J Lind, Philip J Drew, Lynn Cawkwell

Abstract read
In one paragraph

Article in Neoplasia (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Biomarkers derived from CmP signal network in triple negative breast cancers.Translational breast cancer research : a journal focusing on translational research in breast cancer · 2023
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  13. The British journal of radiology · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Laura SmithCancer Biology Proteomics Group, Postgraduate Medical Institute of the University of Hull, Hull, UK.
Omar Qutob
Mark B Watson
Andrew W Beavis
Donna Potts
Kevin J Welham
Veerabhadram Garimella
Michael J Lind
Philip J Drew
Lynn Cawkwell

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeWe aimed to identify putative predictive protein biomarkers of radioresistance. EXPERIMENTAL

designThree breast cancer cell lines (MCF7, MDA-MB-231, and T47D) were used as in vitro models to study radioresistance. Inherent radiosensitivities were examined using a clonogenic survival assay. It was revealed that each cell line differed in their response to radiotherapy. These parental breast cancer cell lines were used to establish novel derivatives (MCF7RR, MDA-MB-231RR, and T47DRR) displaying significant resistance to ionizing radiation. Derivative cells were compared with parental cells to identify putative biomarkers associated with the radioresistant phenotype. To identify these biomarkers, complementary proteomic screening approaches were exploited encompassing two-dimensional gel electrophoresis in combination with mass spectrometry, liquid chromatography coupled with tandem mass spectrometry and quantitative proteomics using iTRAQ technology.

resultsA large number of potential biomarkers were identified, and several of these were confirmed using Western blot analysis. In particular, a decrease in the expression of the 26S proteasome was found in all radioresistant derivatives when compared with the respective parent cells. Decreased expression of this target was also found to be associated with radioresistant laryngeal tumors (P = .05) in a small pilot immunohistochemical study.

conclusionsThese findings suggest that the 26S proteasome may provide a general predictive biomarker for radiotherapy outcome.

Indexed as

Biomarkers, TumorBlotting, WesternBreast NeoplasmsCell Line, TumorChromatography, LiquidElectrophoresis, Gel, Two-DimensionalFemaleGene Expression ProfilingHumansImmunohistochemistryOligonucleotide Array Sequence AnalysisProteasome Endopeptidase ComplexProteomicsRadiation ToleranceReverse Transcriptase Polymerase Chain ReactionSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationATP dependent 26S proteaseBiomarkers, TumorProteasome Endopeptidase Complex

Identifiers

PMID19881955
PMCPMC2767221

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.