Evidence map›Paper›PMID 19877669›Full record

ArticleBiochemistry2009

Alpha-ketoglutarate controls the ability of the Escherichia coli PII signal transduction protein to regulate the activities of NRII (NrB but does not control the binding of PII to NRII.

Peng Jiang, Alexander J Ninfa

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 38 citations in OpenAlex.

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  11. Coordination of microbial metabolism.Nature reviews. Microbiology · 2014
    Review
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  15. Article
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  18. Review
  19. Mechanism of 2-oxoglutarate signaling by the Synechococcus elongatus PII signal transduction protein.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Peng JiangDepartment of Biological Chemistry, University of Michigan Medical School, Ann Arbor, Michigan 48109-0606, USA. pejiang@umich.edu
Alexander J Ninfa
University of Michigan–Ann Arbor · US

Funding

Structure/function analysis of the E. coli NIR/NRII signal transduction systemR01GM059637 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI NINFA, ALEXANDER J. · 2001 to 2009
$2.3M
NIGMS NIH HHS GM59637
6 · The paper itself

Abstract

PII signal transduction proteins are among the most widely distributed signaling proteins in nature; these proteins are direct sensors of alpha-ketoglutarate and adenylylate energy charge and control receptors that are signal transduction proteins, metabolic enzymes, or permeases involved in nitrogen metabolism. Prior studies showed that alpha-ketoglutarate regulated the ability of PII to control the activities of glutamine synthetase adenylyltransferase (ATase) but did not affect the ability of PII to bind to ATase. Here, we show that a similar pattern of alpha-ketoglutarate regulation was obtained with another PII receptor, the two-component system transmitter protein NRII (NtrB). Although alpha-ketoglutarate was required for the binding of PII to NRII, PII bound to NRII equally well as the concentration of alpha-ketoglutarate was varied through its physiological range. Variation of the concentration of alpha-ketoglutarate through its physiological range provided dramatic regulation of the ability of PII to activate the phosphatase activity of NRII and controlled the ability of PII to inhibit the autophosphorylation of NRII. Thus, PII control of NRII activities could be dissected into distinct binding and regulation steps, and when present in its physiological concentration range, alpha-ketoglutarate apparently played a role in only the latter step.

Indexed as

Signal TransductionAdenosine DiphosphateAdenosine TriphosphateBinding SitesEnzyme ActivationEscherichia coli ProteinsKetoglutaric AcidsNucleotidyltransferasesPhosphoprotein PhosphatasesPhosphorylationPII Nitrogen Regulatory ProteinsProtein KinasesAdenosine DiphosphateAdenosine TriphosphateEscherichia coli Proteinsglutamine-synthetase adenylyltransferaseKetoglutaric AcidsNucleotidyltransferasesPhosphoprotein PhosphatasesPII Nitrogen Regulatory Proteinsprotein kinase-phosphatase NTRBProtein Kinases

Identifiers

PMID19877669
PMCPMC2786246
OpenAlexW1997689326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.