Evidence map›Paper›PMID 19876380›Full record

ReviewPLoS computational biology2009

Getting started in gene expression microarray analysis.

Donna K Slonim, Itai Yanai

Abstract readReview
In one paragraph

Review in PLoS computational biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. ThePlant direct · 2022
    Article
  10. Review
  11. Review
  12. Cleaning thePlants (Basel, Switzerland) · 2021
    Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Donna K SlonimDepartment of Computer Science, Tufts University, Medford, Massachusetts, USA. Donna.Slonim@tufts.edu
Itai Yanai

Funding

Translational Bioinformatics for Human Developmental GenomicsR01HD058880 · NICHD · TUFTS UNIVERSITY MEDFORD · PI SLONIM, DONNA K. · 2009 to 2012
$1.3M
Evaluating Biological Networks by Mining Public DataR21LM009411 · NLM · TUFTS UNIVERSITY MEDFORD · PI SLONIM, DONNA K. · 2007 to 2008
$347k
NICHD NIH HHS HD058880NICHD NIH HHS R01 HD058880NLM NIH HHS LM009411NLM NIH HHS R21 LM009411
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Computational BiologyOligonucleotide Array Sequence Analysis

Identifiers

PMID19876380
PMCPMC2762517

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.