Evidence map›Paper›PMID 19875121›Full record

ArticleJournal of biomechanics2010

A numerical model of cellular blebbing: a volume-conserving, fluid-structure interaction model of the entire cell.

Jennifer Young, Sorin Mitran

Abstract read
In one paragraph

Article in Journal of biomechanics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. A Reverse-Osmosis Model of Apoptotic Shrinkage.Frontiers in cell and developmental biology · 2020
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Physical view on migration modes.Cell adhesion & migration · 2015
    Review
  12. The role and regulation of blebs in cell migration.Current opinion in cell biology · 2013
    Review
  13. Article
  14. A computational model of bleb formation.Mathematical medicine and biology : a journal of the IMA · 2013
    Article
  15. Article
  16. Article
  17. Eukaryotic Cell Dynamics from Crawlers to Swimmers.Wiley interdisciplinary reviews. Computational molecular science
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jennifer YoungDepartment of Mathematics, University of North Carolina at Chapel Hill, Phillips Hall, Chapel Hill, NC 27599, USA. jendjoy@email.unc.edu
Sorin Mitran

Funding

Virtual Lung Project: Integrated Modeling of EpithelialR01HL077546 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUPERFINE, RICHARD · 2006 to 2010
$3.6M
NHLBI NIH HHS R01 HL077546NHLBI NIH HHS R01-HL077546-5401A2
6 · The paper itself

Abstract

In animal cells, blebs are smooth, quasi-hemispherical protrusions of the plasma membrane that form when a section of the membrane detaches from the underlying actin cytoskeleton and is inflated by flowing cytosol. The mechanics behind this common cellular activity are not yet clear. As a first step in the development of a full computational framework, we present a numerical model of overall cell behavior based upon the interaction between a background Newtonian-fluid cytosol and elastic structures modeling the membrane and filaments. The detailed micromechanics of the cytoskeletal network are the subject of future work. Here, the myosin-driven contraction of the actin network is modeled through stressed elastic filaments. Quantitative models of cytoskeletal micromechanics and biochemistry require accurate estimates of local stress and flow conditions. The main contribution of this paper is the development of a computationally efficient fluid-structure interaction model based on operator splitting, to furnish this data. Cytosol volume conservation (as supported by experimental evidence) is enforced through an intermediate energy minimization step. Realistic bleb formation and retraction is observed from this model, offering an alternative formulation to positing complex continuum behavior of the cytoplasm (e.g. poroelastic model of Charras et al., 2008).

Indexed as

Models, BiologicalActinsAnimalsBiomechanical PhenomenaCell SizeCell Surface ExtensionsComputer SimulationCytoskeletonCytosolElasticityIntracellular FluidMyosinsActinsMyosins

Identifiers

PMID19875121
PMCPMC2813352

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.