Evidence map›Paper›PMID 19864428›Full record

ArticleThe Journal of biological chemistry2010

Structural basis of human p70 ribosomal S6 kinase-1 regulation by activation loop phosphorylation.

Tomoko Sunami, Noel Byrne, Ronald E Diehl, Kaoru Funabashi, Dawn L Hall, Mari Ikuta, Sangita B Patel, Jennifer M Shipman, Robert F Smith, Ikuko Takahashi and 5 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 54 citations in OpenAlex.

  1. Trial
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  7. Review
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  11. A viral kinase mimics S6 kinase to enhance cell proliferation.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  12. Article
  13. Development of organometallic S6K1 inhibitors.Journal of medicinal chemistry · 2015
    Article
  14. Article
  15. Review
  16. Crystal structures of the S6K1 kinase domain in complexes with inhibitors.Journal of structural and functional genomics · 2014
    Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 2 countries.

Tomoko SunamiDepartment of Chemistry, Tsukuba Research Institute, Banyu Pharmaceutical Company, Limited, Tsukuba, Ibaraki, 300-2611, Japan. sunami.tomoko@jaea.go.jp
Noel Byrne
Ronald E Diehl
Kaoru Funabashi
Dawn L Hall
Mari Ikuta
Sangita B Patel
Jennifer M Shipman
Robert F Smith
Ikuko Takahashi
Joan Zugay-Murphy
Yoshikazu Iwasawa
Kevin J Lumb
Sanjeev K Munshi
Sujata Sharma
United States Military Academy · USFood Research Institute · JPGeospatial Information Authority of Japan · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

p70 ribosomal S6 kinase (p70S6K) is a downstream effector of the mTOR signaling pathway involved in cell proliferation, cell growth, cell-cycle progression, and glucose homeostasis. Multiple phosphorylation events within the catalytic, autoinhibitory, and hydrophobic motif domains contribute to the regulation of p70S6K. We report the crystal structures of the kinase domain of p70S6K1 bound to staurosporine in both the unphosphorylated state and in the 3'-phosphoinositide-dependent kinase-1-phosphorylated state in which Thr-252 of the activation loop is phosphorylated. Unphosphorylated p70S6K1 exists in two crystal forms, one in which the p70S6K1 kinase domain exists as a monomer and the other as a domain-swapped dimer. The crystal structure of the partially activated kinase domain that is phosphorylated within the activation loop reveals conformational ordering of the activation loop that is consistent with a role in activation. The structures offer insights into the structural basis of the 3'-phosphoinositide-dependent kinase-1-induced activation of p70S6K and provide a platform for the rational structure-guided design of specific p70S6K inhibitors.

Indexed as

Chromatography, GelCrystallography, X-RayHumansPhosphorylationPolymerase Chain ReactionProtein BindingProtein MultimerizationProtein Structure, SecondaryRibosomal Protein S6 Kinases, 70-kDaStaurosporineUltracentrifugationRibosomal Protein S6 Kinases, 70-kDaStaurosporine

Identifiers

PMID19864428
PMCPMC2836063
OpenAlexW2076638341

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.