Evidence map›Paper›PMID 19861420›Full record

ArticleRNA (New York, N.Y.)2009

Structural features of the tmRNA-ribosome interaction.

Elizaveta Y Bugaeva, Serhiy Surkov, Andrey V Golovin, Lars-Göran Ofverstedt, Ulf Skoglund, Leif A Isaksson, Alexey A Bogdanov, Olga V Shpanchenko, Olga A Dontsova

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Elizaveta Y BugaevaBelozersky Institute, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia.
Serhiy Surkov
Andrey V Golovin
Lars-Göran Ofverstedt
Ulf Skoglund
Leif A Isaksson
Alexey A Bogdanov
Olga V Shpanchenko
Olga A Dontsova
Lomonosov Moscow State University · RUKarolinska Institutet · SEStockholm University · SE

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Trans-translation is a process which switches the synthesis of a polypeptide chain encoded by a nonstop messenger RNA to the mRNA-like domain of a transfer-messenger RNA (tmRNA). It is used in bacterial cells for rescuing the ribosomes arrested during translation of damaged mRNA and directing this mRNA and the product polypeptide for degradation. The molecular basis of this process is not well understood. Earlier, we developed an approach that allowed isolation of tmRNA-ribosomal complexes arrested at a desired step of tmRNA passage through the ribosome. We have here exploited it to examine the tmRNA structure using chemical probing and cryo-electron microscopy tomography. Computer modeling has been used to develop a model for spatial organization of the tmRNA inside the ribosome at different stages of trans-translation.

Indexed as

Nucleic Acid ConformationBase SequenceCryoelectron MicroscopyEscherichia coliModels, MolecularMolecular Sequence DataProtein BiosynthesisRibosomesRNA, BacterialRNA, MessengerRNA, TransferRNA, BacterialRNA, MessengerRNA, Transfer

Identifiers

PMID19861420
PMCPMC2779675
OpenAlexW2097490114

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.