Evidence map›Paper›PMID 19861239›Full record

ArticleBlood cells, molecules & diseases2010

cJun modulates Ggamma-globin gene expression via an upstream cAMP response element.

Sirisha Kodeboyina, Parimaladevi Balamurugan, Li Liu, Betty S Pace

Abstract read
In one paragraph

Article in Blood cells, molecules & diseases, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. MicroRNA29B induces fetal hemoglobinFrontiers in medicine · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. HSF1 protects neurons through a novel trimerization- and HSP-independent mechanism.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  11. Article
  12. Evaluation of Signaling Pathways Involved in γ-Globin Gene Induction Using Fetal Hemoglobin Inducer Drugs.International journal of hematology-oncology and stem cell research · 2013
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sirisha KodeboyinaDepartment of Molecular and Cell Biology, University of Texas at Dallas, PO Box 830688, FO 3.1, Richardson, TX 75083, USA.
Parimaladevi Balamurugan
Li Liu
Betty S Pace
The University of Texas at Dallas · US

Funding

Mechanisms For p38 MAP Kinase DependentT Gene InductionR01HL069234 · NHLBI · UNIVERSITY OF TEXAS DALLAS · PI PACE, BETTY SUE · 2001 to 2017
$4.6M
NHLBI NIH HHS HL69234NHLBI NIH HHS R01 HL069234
6 · The paper itself

Abstract

The upstream Ggamma-globin gene cAMP response element (G-CRE) was previously shown to play a role in drug-mediated fetal hemoglobin induction. This effect is achieved via p38 mitogen activated protein kinase (MAPK)-dependent CREB1 and ATF-2 phosphorylation and G-CRE transactivation. Since this motif is also a predicted consensus binding site for cJun we extended our analysis to determine the ability of cJun to transactivate gamma-globin through the G-CRE. Using chromatin immunoprecipitation assays we showed comparable in vivo cJun and CREB1 binding to the G-CRE region. Protein-protein interactions were confirmed between cJun/ATF-2 and CREB1/ATF-2 but not between CREB1 and cJun. However, we observed cJun and CREB1 binding to the G-CRE in vitro by electrophoretic mobility shift assay. Promoter pull-down assay followed by sequential western blot analysis confirmed co-localization of cJun, CREB1, and ATF-2 on the G-CRE. To show functional relevance, enforced expression studies with pLen-cJun and a Ggamma-promoter (-1500 to +36) luciferase reporter were completed; we observed a concentration-dependent increase in luciferase activity with pLen-cJun similar to that produced by CREB1 enforced expression. Moreover, the G/A mutation at -1225 in the G-CRE abolished cJun transactivation. Finally, enforced cJun expression in K562 cells and normal primary erythroid progenitors enhanced endogenous gamma-globin gene expression. We conclude that these data indicate that cJun activates the Ggamma-globin promoter via the G-CRE in a manner comparable with CREB1 and propose a model for gamma-globin activation based on DNA-protein interactions in the G-CRE.

Indexed as

Gene Expression RegulationResponse Elements5' Untranslated RegionsActivating Transcription Factor 2Cells, CulturedChromatin ImmunoprecipitationCyclic AMPCyclic AMP Response Element-Binding ProteinDNA-Binding ProteinsErythroid Precursor Cellsgamma-GlobinsHistone Deacetylase InhibitorsHumansK562 CellsPhosphorylationPromoter Regions, Genetic5' Untranslated RegionsActivating Transcription Factor 2ATF2 protein, humanCREB1 protein, humanCyclic AMPCyclic AMP Response Element-Binding ProteinDNA-Binding Proteinsgamma-GlobinsHistone Deacetylase InhibitorsProto-Oncogene Proteins c-jun

Identifiers

PMID19861239
PMCPMC2818355
OpenAlexW2049197810

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.