Evidence map›Paper›PMID 19861057›Full record

ArticleEmerging infectious diseases2009

Fine-scale identification of the most likely source of a human plague infection.

Rebecca E Colman, Amy J Vogler, Jennifer L Lowell, Kenneth L Gage, Christina Morway, Pamela J Reynolds, Paul Ettestad, Paul Keim, Michael Y Kosoy, David M Wagner

Abstract read
In one paragraph

Article in Emerging infectious diseases, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Predicting global potential distribution ofFrontiers in public health · 2022
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Rebecca E ColmanNorthern Arizona University, Flagstaff, Arizona 86011-5640, USA.
Amy J Vogler
Jennifer L Lowell
Kenneth L Gage
Christina Morway
Pamela J Reynolds
Paul Ettestad
Paul Keim
Michael Y Kosoy
David M Wagner

Funding

Vaccines and Diagnostics TrialsU54AI065359 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI BARBOUR, ALAN G. · 2005 to 2013
$88.8M
Genetic Characterization and Biology of Plague from Multiple FociR15AI070183 · NIAID · NORTHERN ARIZONA UNIVERSITY · PI WAGNER, DAVID M · 2006 to 2006
$221k
NIAID NIH HHS 1R15AI070183NIAID NIH HHS AI065359NIAID NIH HHS R15 AI070183NIAID NIH HHS U54 AI065359
6 · The paper itself

Abstract

We describe an analytic approach to provide fine-scale discrimination among multiple infection source hypotheses. This approach uses mutation-rate data for rapidly evolving multiple locus variable-number tandem repeat loci in probabilistic models to identify the most likely source. We illustrate the utility of this approach using data from a North American human plague investigation.

Indexed as

Molecular EpidemiologyEvolution, MolecularGenotypeHumansModels, StatisticalMutationNew MexicoPlagueYersinia pestis

Identifiers

PMID19861057
PMCPMC2866393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.