Evidence map›Paper›PMID 19859740›Full record

ArticleHuman genetics2010

Malaria severity and human nitric oxide synthase type 2 (NOS2) promoter haplotypes.

Marc C Levesque, Maurine R Hobbs, Charles W O'Loughlin, Jennifer A Chancellor, Youwei Chen, Ariana N Tkachuk, Jennifer Booth, Kistie B Patch, Sallie Allgood, Ann R Pole and 9 more

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Polymorphisms in host genes encoding NOSII, C-reactive protein, and adhesion molecules thrombospondin and E-selectin are risk factors for Plasmodium falciparum malaria in India.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2015
    Article
  10. Inducible nitric oxide synthase (iNOS) regulatory region variation in non-human primates.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2015
    Article
  11. Article
  12. Article
  13. The host genetic diversity in malaria infection.Journal of tropical medicine · 2012
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 8 institutions in 3 countries.

Marc C LevesqueDurham VA Medical Center, Durham, NC, USA. MCL40@pitt.edu
Maurine R Hobbs
Charles W O'Loughlin
Jennifer A Chancellor
Youwei Chen
Ariana N Tkachuk
Jennifer Booth
Kistie B Patch
Sallie Allgood
Ann R Pole
Carolyn A Fernandez
Esther D Mwaikambo
Theonest K Mutabingwa
Michal Fried
Bess Sorensen
Patrick E Duffy
Donald L Granger
Nicholas M Anstey
J Brice Weinberg
Duke University · USUniversity of Utah · USCenter for Infectious Disease Research · USDurham VA Medical Center · USHubert Kairuki Memorial University · TZNational Institute for Medical Research · TZRoyal Darwin Hospital · AUSalt Lake Regional Medical Center · US

Funding

Malaria Pathogenesis in young children and vaccine discoveryZIAAI001134 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI DUFFY, PATRICK · 2010 to 2025
$11.3M
NITRIC OXIDE AND SEVERE MALARIAR01AI041764 · NIAID · DUKE UNIVERSITY · PI WEINBERG, JOE BRICE · 1997 to 2012
$6.3M
Pathogenesis of falciparum malaria in infancyR01AI052059 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI DUFFY, PATRICK E · 2001 to 2004
$2.7M
NIAID NIH HHS R01 AI041764NIAID NIH HHS R01 AI052059
6 · The paper itself

Abstract

Nitric oxide (NO) mediates host resistance to severe malaria and other infectious diseases. NO production and mononuclear cell expression of the NO producing enzyme-inducible nitric oxide synthase (NOS2) have been associated with protection from severe falciparum malaria. The purpose of this study was to identify single nucleotide polymorphisms (SNPs) and haplotypes in the NOS2 promoter, to identify associations of these haplotypes with malaria severity and to test the effects of these polymorphisms on promoter activity. We identified 34 SNPs in the proximal 7.3 kb region of the NOS2 promoter and inferred NOS2 promoter haplotypes based on genotyping 24 of these SNPs in a population of Tanzanian children with and without cerebral malaria. We identified 71 haplotypes; 24 of these haplotypes comprised 82% of the alleles. We determined whether NOS2 promoter haplotypes were associated with malaria severity in two groups of subjects from Dar es Salaam (N = 185 and N = 250) and in an inception cohort of children from Muheza-Tanga, Tanzania (N = 883). We did not find consistent associations of NOS2 promoter haplotypes with malaria severity or malarial anemia, although interpretation of these results was potentially limited by the sample size of each group. Furthermore, cytokine-induced NOS2 promoter activity determined using luciferase reporter constructs containing the proximal 7.3 kb region of the NOS2 promoter and the G-954C or C-1173T SNPs did not differ from NOS2 promoter constructs that lacked these polymorphisms. Taken together, these studies suggest that the relationship between NOS2 promoter polymorphisms and malaria severity is more complex than previously described.

Indexed as

Polymorphism, Single NucleotideAllelesBase SequenceCell Line, TumorChildChild, PreschoolGene FrequencyGenetic HeterogeneityGenotypeHaplotypesHumansInfantKenyaLinkage DisequilibriumMalariaMolecular Sequence DataNitric Oxide Synthase Type IINOS2 protein, human

Identifiers

PMID19859740
PMCPMC2939908
OpenAlexW2021747383

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.