Evidence map›Paper›PMID 19857250›Full record

ArticleJournal of translational medicine2009

Epigenetic control of the ubiquitin carboxyl terminal hydrolase 1 in renal cell carcinoma.

Barbara Seliger, Diana Handke, Elisabeth Schabel, Juergen Bukur, Rudolf Lichtenfels, Reinhard Dammann

Open access · goldAbstract read
In one paragraph

Article in Journal of translational medicine, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 28 citations in OpenAlex.

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  18. Genetic and epigenetic alterations during renal carcinogenesis.International journal of clinical and experimental pathology · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Barbara SeligerMartin Luther University Halle-Wittenberg, Institute of Medical Immunology, Halle, Germany. Barbara.Seliger@medizin.uni-halle.de
Diana Handke
Elisabeth Schabel
Juergen Bukur
Rudolf Lichtenfels
Reinhard Dammann
Martin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe ubiquitin carboxyl-terminal hydrolase 1 (UCHL1) gene involved in the regulation of cellular ubiquitin levels plays an important role in different cellular processes including cell growth and differentiation. Aberrant expression of UCHL1 has been found in a number of human solid tumors including renal cell carcinoma (RCC). In RCC, UCHL1 overexpression is associated with tumor progression and an altered von Hippel Lindau gene expression.

methodsTo determine the underlying mechanisms for the heterogeneous UCHL1 expression pattern in RCC the UCHL1 promoter DNA methylation status was determined in 17 RCC cell lines as well as in 32 RCC lesions and corresponding tumor adjacent kidney epithelium using combined bisulfite restriction analysis as well as bisulfite DNA sequencing.

resultsUCHL1 expression was found in all 32 tumor adjacent kidney epithelium samples. However, the lack of or reduced UCHL1 mRNA and/or protein expression was detected in 13/32 RCC biopsies and 7/17 RCC cell lines and due to either a total or partial methylation of the UCHL1 promoter DNA. Upon 2'-deoxy-5-azacytidine treatment an induction of UCHL1 mRNA and protein expression was found in 9/17 RCC cell lines, which was linked to the demethylation degree of the UCHL1 promoter DNA.

conclusionPromoter hypermethylation represents a mechanism for the silencing of the UCHL1 gene expression in RCC and supports the concept of an epigenetic control for the expression of UCHL1 during disease progression.

Indexed as

Carcinoma, Renal CellEpigenesis, GeneticKidney NeoplasmsBase SequenceBiomarkers, TumorCell Line, TumorDNA MethylationEnzyme InhibitorsGene Expression Regulation, NeoplasticGene SilencingHumansMolecular Sequence DataPromoter Regions, GeneticUbiquitin ThiolesteraseBiomarkers, TumorEnzyme InhibitorsUbiquitin ThiolesteraseUCHL1 protein, human

Identifiers

PMID19857250
PMCPMC2775027
OpenAlexW2166487116

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.