Evidence map›Paper›PMID 19857135›Full record

ArticleMicrobial drug resistance (Larchmont, N.Y.)2009

Molecular epidemiologic analysis of Enterococcus faecalis isolates in Cuba by multilocus sequence typing.

Dianelys Quiñones, Nobumichi Kobayashi, Shigeo Nagashima

Open access · greenAbstract read
In one paragraph

Article in Microbial drug resistance (Larchmont, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Heterogeneity and metabolic diversity amongMicrobiology spectrum · 2025
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  3. Isolation ofAntibiotics (Basel, Switzerland) · 2025
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  4. A Genomic Snapshot of Antibiotic-ResistantGlobal health, epidemiology and genomics · 2023
    Article
  5. Article
  6. Article
  7. Prevalence of an Intestinal ST40International journal of molecular sciences · 2020
    Article
  8. Molecular Characterization Of Vancomycin-ResistantInfection and drug resistance · 2019
    Article
  9. Genomic analysis of multidrug-resistant clinicalAntimicrobial resistance and infection control · 2019
    Article
  10. Article
  11. Article
  12. Regional spread and control of vancomycin-resistant Enterococcus faecium and Enterococcus faecalis in Kyoto, Japan.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Dianelys QuiñonesDepartment of Bacteriology-Mycology, Pedro Kourí Institute of Tropical Medicine, Havana, Cuba. diany.quinones@infomed.sld.cu
Nobumichi Kobayashi
Shigeo Nagashima
Sapporo Medical University · JPInstituto de Medicina Tropical “Pedro Kourí” · CU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We carried out the first study of Enterococcus faecalis clinical isolates in Cuba by multilocus sequence typing linking the molecular typing data with the presence of virulence determinants and the antibiotic resistance genes. A total of 23 E. faecalis isolates recovered from several clinic sources and geographic areas of Cuba during a period between 2000 and 2005 were typed by multilocus sequence typing. Thirteen sequence types (STs) including five novel STs were identified, and the ST 64 (clonal complex [CC] 8), ST 6 (CC2), ST 21(CC21), and ST 16 (CC58) were found in more than one strain. Sixty-seven percent of STs corresponded to STs reported previously in Spain, Poland, and The Netherlands, and other STs (ST115, ST64, ST6, and ST40) were genetically close to those detected in the United States. Prevalence of both antimicrobial resistance genes [aac(6')-aph(2''), aph(3'), ant(6), ant(3'')(9), aph(2'')-Id, aph(2'')-Ic, erm(B), erm(A), erm(C), mef(A), tet(M), and tet(L)] and virulence genes (agg, gelE, cylA, esp, ccf, and efaAfs) were examined by polymerase chain reaction. Aminoglycoside resistance genes aac(6')-Ie-aph(2'')-Ia, aph(3'), ant(6), ant(3'')(9) were more frequently detected in ST6, ST16, ST23, ST64, and ST115. The multidrug resistance was distributed to all STs detected, except for ST117 and singleton ST225. The presence of cyl gene was specifically linked to the ST64 and ST16. Presence of the esp, gel, and agg genes was not specific to any particular ST. This research provided the first insight into the population structure of E. faecalis in Cuba, that is, most Cuban strains were related to European strains, whereas others to U.S. strains. The CC2, CC21, and CC8, three of the biggest CCs in the world, were evidently circulating in Cuba, associated with multidrug resistance and virulence traits.

Indexed as

Anti-Bacterial AgentsBacterial Typing TechniquesCubaDrug Resistance, Multiple, BacterialEnterococcus faecalisHumansMicrobial Sensitivity TestsMolecular EpidemiologyMolecular Sequence DataPolymerase Chain ReactionAnti-Bacterial Agents

Identifiers

PMID19857135
PMCPMC3145955
OpenAlexW2027523350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.