Evidence map›Paper›PMID 19856176›Full record

ArticleAnalytical and bioanalytical chemistry2010

The use of 35S and Tnos expression elements in the measurement of genetically engineered plant materials.

Marcia J Holden, Marci Levine, Tandace Scholdberg, Ross J Haynes, G Ronald Jenkins

Open access · hybridAbstract readEvaluation Study
In one paragraph

Article in Analytical and bioanalytical chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Marcia J HoldenBiochemical Science Division, National Institute of Standards and Technology (NIST), 100 Bureau Dr., Gaithersburg, MD 20899, USA. marcia.holden@nist.gov
Marci Levine
Tandace Scholdberg
Ross J Haynes
G Ronald Jenkins
National Institute of Standards and Technology · USUnited States Department of Agriculture · USInternational Life Sciences Institute India · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An online survey was conducted by the International Life Sciences Institute, Food Biotechnology Committee, on the use of qualitative and quantitative polymerase chain reaction (PCR) assays for cauliflower mosaic virus 35S promoter and Agrobacterium tumefaciens Tnos DNA sequence elements for the detection of genetically engineered (GE) crop plant material. Forty-four testing laboratories around the world completed the survey. The results showed the widespread use of such methods, the multiplicity of published and in-house methods, and the variety of reference materials and calibrants in use. There was an interest on the part of respondents in validated quantitative assays relevant to all GE events that contain these two genetic elements. Data are presented by testing two variations each of five published real-time quantitative PCR methods for 35S detection on eight maize reference materials. The results showed that two of the five methods were not suitable for all the eight reference materials, with poor linear regression parameters and multiple PCR amplification products for some of the reference materials. This study demonstrates that not all 35S methods produce satisfactory results, emphasizing the need for method validation.

Indexed as

Promoter Regions, GeneticAgrobacterium tumefaciensBase SequenceCaulimovirusGenetic EngineeringGenetic VectorsMolecular Sequence DataPlants, Genetically ModifiedPolymerase Chain ReactionZea mays

Identifiers

PMID19856176
PMCPMC2836466
OpenAlexW2139337526

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.