Evidence map›Paper›PMID 19855395›Full record

ArticleNature structural & molecular biology2009

Involvement of a chromatin remodeling complex in damage tolerance during DNA replication.

Karina B Falbo, Constance Alabert, Yuki Katou, Su Wu, Junhong Han, Tammy Wehr, Jing Xiao, Xiangwei He, Zhiguo Zhang, Yang Shi and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Article
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  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Review
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  13. Article
  14. The INO80 remodeller in transcription, replication and repair.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  15. Genome maintenance functions of the INO80 chromatin remodeller.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  16. Article
  17. Monoubiquitylation of histone H2B contributes to the bypass of DNA damage during and after DNA replication.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 3 countries.

Karina B FalboDepartment of Carcinogenesis, Science Park Research Division, MD Anderson Cancer Center, Smithville, Texas, USA.
Constance Alabert
Yuki Katou
Su Wu
Junhong Han
Tammy Wehr
Jing Xiao
Xiangwei He
Zhiguo Zhang
Yang Shi
Katsu Shirahige
Philippe Pasero
Xuetong Shen
The University of Texas MD Anderson Cancer Center · USCentre National de la Recherche Scientifique · FRHarvard University · USMayo Clinic · USTokyo Institute of Technology · JPBaylor College of Medicine · US

Funding

Pilot Project ProgramP30ES007784 · NIEHS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RICHIE, ELLEN R · 1996 to 2011
$16.4M
Histone chaperones and transcriptional silencingR01GM072719 · NIGMS · MAYO CLINIC ROCHESTER · PI ZHANG, ZHIGUO · 2005 to 2015
$2.9M
NIEHS NIH HHS ES07784NIEHS NIH HHS P30 ES007784NIGMS NIH HHS GM71729NIGMS NIH HHS R01 GM072719
6 · The paper itself

Abstract

ATP-dependent chromatin remodeling complexes have been shown to participate in DNA replication in addition to transcription and DNA repair. However, the mechanisms of their involvement in DNA replication remain unclear. Here, we reveal a specific function of the yeast INO80 chromatin remodeling complex in the DNA damage tolerance pathways. Whereas INO80 is necessary for the resumption of replication at forks stalled by methyl methane sulfonate (MMS), it is not required for replication fork collapse after treatment with hydroxyurea (HU). Mechanistically, INO80 regulates DNA damage tolerance during replication through modulation of PCNA (proliferating cell nuclear antigen) ubiquitination and Rad51-mediated processing of recombination intermediates at impeded replication forks. Our findings establish a mechanistic link between INO80 and DNA damage tolerance pathways, indicating that chromatin remodeling is important for accurate DNA replication.

Indexed as

Chromatin Assembly and DisassemblyChromatin ImmunoprecipitationDNA DamageDNA ReplicationFlow CytometryHydroxyureaProliferating Cell Nuclear AntigenRad51 RecombinaseSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinationHydroxyureaProliferating Cell Nuclear AntigenRAD51 protein, S cerevisiaeRad51 RecombinaseSaccharomyces cerevisiae Proteins

Identifiers

PMID19855395
PMCPMC2974178
OpenAlexW2078167546

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.