Evidence map›Paper›PMID 19855079›Full record

ArticleBlood2009

Comprehensive genomic screens identify a role for PLZF-RARalpha as a positive regulator of cell proliferation via direct regulation of c-MYC.

Kim L Rice, Itsaso Hormaeche, Sergei Doulatov, Jared M Flatow, David Grimwade, Ken I Mills, Magdalena Leiva, Julien Ablain, Charuta Ambardekar, Melanie J McConnell and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 54 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Eya2, a Target Activated by Plzf, Is Critical forMolecular and cellular biology · 2017
    Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. MYC oncogene in myeloid neoplasias.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2013
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 9 institutions in 5 countries.

Kim L RiceDivision of Hematology/Oncology, Northwestern University, Robert H. Lurie Comprehensive Cancer Center, Chicago, IL, USA.
Itsaso Hormaeche
Sergei Doulatov
Jared M Flatow
David Grimwade
Ken I Mills
Magdalena Leiva
Julien Ablain
Charuta Ambardekar
Melanie J McConnell
John E Dick
Jonathan D Licht
Northwestern University · USRobert H. Lurie Comprehensive Cancer Center of Northwestern UniversityCentre National de la Recherche Scientifique · FRKing's College London · GBMalaghan Institute of Medical Research · NZQueen's University Belfast · GBToronto General Hospital · CAUniversité Paris Cité · FRUniversity Health Network · CA

Funding

The PLZF Protein of t(11;17)-Promyelocytic LeukemiaR01CA059936 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LICHT, JONATHAN · 1993 to 2007
$2.9M
NCI NIH HHS CA-59936NCI NIH HHS R01 CA059936
6 · The paper itself

Abstract

The t(11;17)(q23;q21) translocation is associated with a retinoic acid (RA)-insensitive form of acute promyelocytic leukemia (APL), involving the production of reciprocal fusion proteins, promyelocytic leukemia zinc finger-retinoic acid receptor alpha (PLZF-RARalpha) and RARalpha-PLZF. Using a combination of chromatin immunoprecipitation promotor arrays (ChIP-chip) and gene expression profiling, we identify novel, direct target genes of PLZF-RARalpha that tend to be repressed in APL compared with other myeloid leukemias, supporting the role of PLZF-RARalpha as an aberrant repressor in APL. In primary murine hematopoietic progenitors, PLZF-RARalpha promotes cell growth, and represses Dusp6 and Cdkn2d, while inducing c-Myc expression, consistent with its role in leukemogenesis. PLZF-RARalpha binds to a region of the c-MYC promoter overlapping a functional PLZF site and antagonizes PLZF-mediated repression, suggesting that PLZF-RARalpha may act as a dominant-negative version of PLZF by affecting the regulation of shared targets. RA induced the differentiation of PLZF-RARalpha-transformed murine hematopoietic cells and reduced the frequency of clonogenic progenitors, concomitant with c-Myc down-regulation. Surviving RA-treated cells retained the ability to be replated and this was associated with sustained c-Myc expression and repression of Dusp6, suggesting a role for these genes in maintaining a self-renewal pathway triggered by PLZF-RARalpha.

Indexed as

Cell ProliferationAnimalsAntineoplastic AgentsCell SurvivalChromatin ImmunoprecipitationCyclin-Dependent Kinase Inhibitor p19Dual Specificity Phosphatase 6Gene Expression ProfilingGene Expression Regulation, LeukemicGenome, HumanGenome-Wide Association StudyHematopoietic Stem CellsHumansLeukemia, Promyelocytic, AcuteMiceOligonucleotide Array Sequence AnalysisAntineoplastic AgentsCdkn2d protein, mouseCyclin-Dependent Kinase Inhibitor p19Dual Specificity Phosphatase 6Dusp6 protein, mouseOncogene Proteins, FusionPLZF-RARalpha fusion protein, humanPLZF-RARalpha fusion protein, mouseProto-Oncogene Proteins c-mycTretinoin

Identifiers

PMID19855079
PMCPMC2798864
OpenAlexW1971273692

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.