Evidence map›Paper›PMID 19854919›Full record

ArticleApplied and environmental microbiology2009

Enteric viruses in raw vegetables and groundwater used for irrigation in South Korea.

Sooryun Cheong, Cheonghoon Lee, Sung Won Song, Weon Cheon Choi, Chan Hee Lee, Sang-Jong Kim

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 110 citations in OpenAlex.

  1. Recovery of Nucleic Acids of Enteric Viruses and Host-SpecificApplied and environmental microbiology · 2021
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Cellulose-based virus-retentive filters: a review.Re/views in environmental science and bio/technology · 2017
    Review
  9. Fate of Foodborne Viruses in the "Farm to Fork" Chain of Fresh Produce.Comprehensive reviews in food science and food safety · 2015
    Article
  10. Article
  11. Article
  12. Article
  13. Possible Internalization of an Enterovirus in Hydroponically Grown Lettuce.International journal of environmental research and public health · 2015
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Pesticide spraying may spread norovirus.Environmental health perspectives · 2013
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sooryun CheongSchool of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul 151-742, South Korea.
Cheonghoon Lee
Sung Won Song
Weon Cheon Choi
Chan Hee Lee
Sang-Jong Kim
Seoul National University · KRChungbuk National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Raw vegetables irrigated with groundwater that may contain enteric viruses can be associated with food-borne viral disease outbreaks. In this study, we performed reverse transcription-PCR (RT-PCR) and cell culture-PCR to monitor the occurrence of enteric viruses in groundwater samples and in raw vegetables that were cultivated using that groundwater in South Korea. Samples were collected 10 times from three farms located in Gyeonggi Province, South Korea. RT-PCR and cell culture-PCR were performed to detect adenoviruses (AdVs), enteroviruses (EVs), noroviruses (NoVs), and rotaviruses, followed by sequence analyses of the detected strains. Of the 29 groundwater samples and the 30 vegetable samples, five (17%) and three (10%) were positive for enteric viruses, respectively. AdVs were the most frequently detected viruses in four groundwater and three vegetable samples. EVs and NoVs were detected in only one groundwater sample and one spinach sample, respectively. The occurrence of enteric viruses in groundwater and vegetable samples was not correlated with the water temperature and the levels of indicator bacteria, respectively. Phylogenetic analysis indicated that most of the detected AdVs were temporally distributed, irrespective of sample type. Our results indicate that raw vegetables may be contaminated with a broad range of enteric viruses, which may originate from virus-infected farmers and virus-contaminated irrigation water, and these vegetables may act as a potential vector of food-borne viral transmission.

Indexed as

Republic of KoreaAdenoviridaeBacteriaDNA, ViralEnterovirusFresh WaterNorovirusPolymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, ViralRotavirusTemperatureVegetablesDNA, ViralRNA, Viral

Identifiers

PMID19854919
PMCPMC2794108
OpenAlexW2165997995

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.