Evidence map›Paper›PMID 19854893›Full record

ArticleJournal of bacteriology2010

Cytoplasmic histidine kinase (HP0244)-regulated assembly of urease with UreI, a channel for urea and its metabolites, CO2, NH3, and NH4(+), is necessary for acid survival of Helicobacter pylori.

David R Scott, Elizabeth A Marcus, Yi Wen, Siddarth Singh, Jing Feng, George Sachs

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 77 citations in OpenAlex.

  1. ModifiedWorld journal of gastroenterology · 2017
    Trial
  2. Review
  3. Urease promotes pH homeostasis and growth ofJournal of bacteriology · 2025
    Article
  4. Mechanisms of bacterial host-to-host transmission.Microbiology and molecular biology reviews : MMBR · 2025
    Review
  5. Comparative genomic analysis of 255Microbiology spectrum · 2025
    Article
  6. Article
  7. Review
  8. A Mini-review onEndocrine, metabolic & immune disorders drug targets · 2024
    Review
  9. Can Pyomelanin Produced byInternational journal of molecular sciences · 2023
    Article
  10. The Influence ofAntibiotics (Basel, Switzerland) · 2023
    Review
  11. How Long Will It Take to Launch an EffectiveInfection and drug resistance · 2023
    Review
  12. Article
  13. Review
  14. Article
  15. MicroRNA Modulation of Host Immune Response and Inflammation Triggered byInternational journal of molecular sciences · 2021
    Review
  16. Review
  17. Pathways of Gastric Carcinogenesis,International journal of molecular sciences · 2020
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

David R ScottDepartment of Physiology, David Geffen School of Medicine at UCLA, 405 Hilgard Ave., Los Angeles, California 90024, USA. dscott@ucla.edu
Elizabeth A Marcus
Yi Wen
Siddarth Singh
Jing Feng
George Sachs
VA Greater Los Angeles Healthcare System · USUniversity of California, Los Angeles · USUniversity of Iowa Hospitals and Clinics · US

Funding

GASTROENTEROLOGYT32DK007180 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JENSEN, DENNIS MICHAEL · 1986 to 2025
$10.0M
Structure-Function Studies of the Proton-Gated Urea Channel from H. PyloriR01AI078000 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI LUECKE, HARTMUT · 2008 to 2016
$4.3M
The Gastric Biology of Helicobacter PyloriR01DK053642 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SACHS, GEORGE · 1997 to 2012
$3.2M
THE GASTRIC ACID PUMP AS A TARGET FOR ULCER TREATMENTR01DK058333 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SACHS, GEORGE · 2000 to 2009
$2.6M
The Gastric Acid Pump as a Target for Ulcer TreatmentR56DK058333 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SACHS, GEORGE · 2010 to 2010
$229k
NIAID NIH HHS AI078000NIAID NIH HHS R01 AI078000NIDDK NIH HHS DK053642NIDDK NIH HHS DK058333NIDDK NIH HHS R01 DK053642NIDDK NIH HHS R01 DK058333NIDDK NIH HHS R56 DK058333NIDDK NIH HHS T32 DK007180NIDDK NIH HHS T32 DK07180-34
6 · The paper itself

Abstract

Helicobacter pylori colonizes the normal human stomach by maintaining both periplasmic and cytoplasmic pH close to neutral in the presence of gastric acidity. Urease activity, urea flux through the pH-gated urea channel, UreI, and periplasmic alpha-carbonic anhydrase are essential for colonization. Exposure to pH 4.5 for up to 180 min activates total bacterial urease threefold. Within 30 min at pH 4.5, the urease structural subunits, UreA and UreB, and the Ni(2+) insertion protein, UreE, are recruited to UreI at the inner membrane. Formation of this complex and urease activation depend on expression of the cytoplasmic sensor histidine kinase, HP0244. Its deletion abolishes urease activation and assembly, impairs cytoplasmic and periplasmic pH homeostasis, and depolarizes the cells, with an approximately 7-log loss of survival at pH 2.5, even in 10 mM urea. Associated with this assembly, UreI is able to transport NH(3), NH(4)(+), and CO(2), as shown by changes in cytoplasmic pH following exposure to NH(4)Cl or CO(2). To be able to colonize cells in the presence of the highly variable pH of the stomach, the organism expresses two pH-sensor histidine kinases, one, HP0165, responding to a moderate fall in periplasmic pH and the other, HP0244, responding to cytoplasmic acidification at a more acidic medium pH. Assembly of a pH-regulatory complex of active urease with UreI provides an advantage for periplasmic buffering.

Indexed as

AmmoniaBacterial ProteinsBlotting, WesternCarbon DioxideCytoplasmHelicobacter pyloriHistidine KinaseHydrogen-Ion ConcentrationMembrane PotentialsMembrane Transport ProteinsMutagenesisPeriplasmProtein KinasesQuaternary Ammonium CompoundsUreaUreaseAmmoniaBacterial ProteinsCarbon DioxideHistidine KinaseMembrane Transport ProteinsProtein KinasesQuaternary Ammonium CompoundsUreaUreaseUreI protein, Helicobacter pylori

Identifiers

PMID19854893
PMCPMC2798266
OpenAlexW2127910083

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.